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Protein
Submitted name:

Meiotic recombination protein SPO11, putative

Gene

Phum_PHUM436850

Organism
Pediculus humanus subsp. corporis (Body louse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA topoisomerase type II (ATP-hydrolyzing) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA catabolic process, endonucleolytic Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Meiotic recombination protein SPO11, putativeImported (EC:5.99.1.3Imported)
Gene namesi
ORF Names:Phum_PHUM436850Imported
OrganismiPediculus humanus subsp. corporis (Body louse)Imported
Taxonomic identifieri121224 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraParaneopteraPhthirapteraAnopluraPediculidaePediculus
ProteomesiUP000009046 Componenti: Partially assembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. chromosome Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

InParanoidiE0VTS0.
KOiK10878.
OMAiFTDGDPY.
OrthoDBiEOG72ZCF6.
PhylomeDBiE0VTS0.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR013048. Meiotic_Spo11.
IPR002815. Spo11/TopoVI_A.
IPR013049. Spo11/TopoVI_A_N.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR10848. PTHR10848. 1 hit.
PfamiPF04406. TP6A_N. 1 hit.
[Graphical view]
PRINTSiPR01551. SPO11HOMOLOG.
PR01550. TOP6AFAMILY.
SUPFAMiSSF56726. SSF56726. 1 hit.

Sequencei

Sequence statusi: Complete.

E0VTS0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIFSEVLSIL RLELIDIYSE TFEESPDNSA SKKEEHLRKI ESVILKVVKE
60 70 80 90 100
ISRNQIPYFE TILHTDCSNC YFDGRIKLKK EKLKIIKINF GKGNCRSKFA
110 120 130 140 150
TIMYLLSKIH KLLTTGQVST RRELYYKNLK NFKSQRDVDI AIKDISYILN
160 170 180 190 200
APPWELGVLA TSKGMVSGPL LLHLKNGQVL NCNIKEGVSV PINVSDVENL
210 220 230 240 250
TSTAKWMLII EKDASFQTLL DSSAVEKLDS CILITGKGFP DVNTRMLVCK
260 270 280 290 300
VWQKLQIPIL ALCDADPYGF EIMCVYRFGS VSMSNLADSL ACPSIRWLGI
310 320 330 340 350
HPNDIKPLLL NSQTLSANDI KKIKNAMNRS YVQKNFNLIN QLQTFLKENR
360 370 380
KAEIEEISNI SPNFLIDVYL KNKIQCKEYY
Length:380
Mass (Da):43,377
Last modified:November 1, 2010 - v1
Checksum:i14CCEB68A0A16772
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS235771 Genomic DNA. Translation: EEB16776.1.
RefSeqiXP_002429514.1. XM_002429469.1.

Genome annotation databases

EnsemblMetazoaiPHUM436850-RA; PHUM436850-PA; PHUM436850.
GeneIDi8230584.
KEGGiphu:Phum_PHUM436850.
VectorBaseiPHUM436850. Pediculus humanus.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS235771 Genomic DNA. Translation: EEB16776.1.
RefSeqiXP_002429514.1. XM_002429469.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiPHUM436850-RA; PHUM436850-PA; PHUM436850.
GeneIDi8230584.
KEGGiphu:Phum_PHUM436850.
VectorBaseiPHUM436850. Pediculus humanus.

Organism-specific databases

CTDi8230584.

Phylogenomic databases

InParanoidiE0VTS0.
KOiK10878.
OMAiFTDGDPY.
OrthoDBiEOG72ZCF6.
PhylomeDBiE0VTS0.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR013048. Meiotic_Spo11.
IPR002815. Spo11/TopoVI_A.
IPR013049. Spo11/TopoVI_A_N.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR10848. PTHR10848. 1 hit.
PfamiPF04406. TP6A_N. 1 hit.
[Graphical view]
PRINTSiPR01551. SPO11HOMOLOG.
PR01550. TOP6AFAMILY.
SUPFAMiSSF56726. SSF56726. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle."
    Kirkness E.F., Haas B.J., Sun W., Braig H.R., Perotti M.A., Clark J.M., Lee S.H., Robertson H.M., Kennedy R.C., Elhaik E., Gerlach D., Kriventseva E.V., Elsik C.G., Graur D., Hill C.A., Veenstra J.A., Walenz B., Tubio J.M.
    , Ribeiro J.M., Rozas J., Johnston J.S., Reese J.T., Popadic A., Tojo M., Raoult D., Reed D.L., Tomoyasu Y., Krause E., Mittapalli O., Margam V.M., Li H.M., Meyer J.M., Johnson R.M., Romero-Severson J., Vanzee J.P., Alvarez-Ponce D., Vieira F.G., Aguade M., Guirao-Rico S., Anzola J.M., Yoon K.S., Strycharz J.P., Unger M.F., Christley S., Lobo N.F., Seufferheld M.J., Wang N., Dasch G.A., Struchiner C.J., Madey G., Hannick L.I., Bidwell S., Joardar V., Caler E., Shao R., Barker S.C., Cameron S., Bruggner R.V., Regier A., Johnson J., Viswanathan L., Utterback T.R., Sutton G.G., Lawson D., Waterhouse R.M., Venter J.C., Strausberg R.L., Berenbaum M.R., Collins F.H., Zdobnov E.M., Pittendrigh B.R.
    Proc. Natl. Acad. Sci. U.S.A. 107:12168-12173(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: USDAImported.

Entry informationi

Entry nameiE0VTS0_PEDHC
AccessioniPrimary (citable) accession number: E0VTS0
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 2010
Last sequence update: November 1, 2010
Last modified: January 6, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.