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E0VGK6 (E0VGK6_PEDHC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length927 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
E0VGK6 [UniParc].

Last modified November 2, 2010. Version 1.
Checksum: 2F080EA933FFE744

FASTA927106,343
        10         20         30         40         50         60 
MSDKEDEEQP SEKPFHVDRA KTGRAGCKKC KQKISQGELR MAKLAYNPFG TGTIKQWHHI 

        70         80         90        100        110        120 
QCIFDVFKKQ RATTKKIEHP DEIGGWDNLN ENDQQEIINY FPPELQKIFE SASRETLNAT 

       130        140        150        160        170        180 
LQHKDSLNKI IEKKFANHKD NSFKMFRKIC VDLANDSSYL TKTKIVADFF NKGSDGESFK 

       190        200        210        220        230        240 
SDYELWCRLL LPGAVIRVYN LQSKQLIKLF SKILGVDHDA MLEDLEKGDV AETISSFFKT 

       250        260        270        280        290        300 
STKIKEANKS TLTLQEVDEF LEKLSKMTKE DEQNYHFKGI TKKCTANDLK MIIRLIKHDL 

       310        320        330        340        350        360 
RINAGPKHIL EALHKDAYKA FQTSRDIKSV VYNAIKAREK NNNKKNEKLN SEKGMDISIN 

       370        380        390        400        410        420 
MMTPVLPMLA QPCKSVEMAL EKCPNGMFSE IKYDGERVQL HKLGDTFKYF SRSLKPVLAH 

       430        440        450        460        470        480 
KVSHFKEYIP QAFPYGKDLI LDAEILMVDN NTGKPLPFGT LGIHKKSEFK NANVCLFVFD 

       490        500        510        520        530        540 
CMYYNGQSLL TTCLSERKSI LRQNMVEINN HIMFSEMEEI NRAEDLEEMI TKVFKQGLEG 

       550        560        570        580        590        600 
LVLKDKKSVY EPGKRHWLKV KKDYLCDGAM ADSADLVVLG AWFGTGHKGG IMSSFLMGCY 

       610        620        630        640        650        660 
DAKSKKWVTV TKVSSGHDEQ TLDRIQKELS VVKISKDPSK VPNWLNCTKT MIPDFVANDP 

       670        680        690        700        710        720 
KKMPVWEITG AEFTCNQVHT ANGISIRFPR VTKIRSDKDW ASATNLSELK KLFKKSKDTS 

       730        740        750        760        770        780 
NFSLLNTSRS SSSTGGETTG DDGTPKKLKK RKNDDDDEKK TDTTTVKKSR KADENVEAYF 

       790        800        810        820        830        840 
EETDTEEEEE KNPSENSESK EKSFSNPLPN IFTGCVIQIP KEYKNYDLLR RYLIAYDGKL 

       850        860        870        880        890        900 
YDPEKETSVE NGKNKVTHVI HLNKVGKIVK NEKYWDKGVR HVHVNWIWNS IKLLDKQPES 

       910        920 
CHVVTVEQKS GYRYNFKKCY LLNQKNK 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS235148 Genomic DNA. Translation: EEB12512.1.
RefSeqXP_002425250.1. XM_002425205.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8240034.
KEGGphu:Phum_PHUM186980.
VectorBasePHUM186980. Pediculus humanus.

Organism-specific databases

CTD8240034.

Phylogenomic databases

KOK10776.
OMALFSEMKH.
OrthoDBEOG7BKCT2.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.30.1740.10. 1 hit.
3.40.50.10190. 1 hit.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
IPR001510. Znf_PARP.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF00645. zf-PARP. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 1 hit.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
PS50064. PARP_ZN_FINGER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE0VGK6_PEDHC
AccessionPrimary (citable) accession number: E0VGK6
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: November 13, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)