E0VBJ1 (E0VBJ1_PEDHC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Semaphorin-1A, putative EMBL EEB10747.1

Gene names

ORF Names:

Phum_PHUM062540 EMBL EEB10747.1

Organism

Pediculus humanus subsp. corporis (Body louse) [Reference proteome]

Taxonomic identifier

121224 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Panarthropoda › Arthropoda › Mandibulata › Pancrustacea › Hexapoda › Insecta › Dicondylia › Pterygota › Neoptera › Paraneoptera › Phthiraptera › Anoplura › Pediculidae › Pediculus › Pediculus humanus

Protein attributes

Sequence length	635 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 Sema domain. SAAS SAAS002165

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS003659
PTM	Disulfide bond SAAS SAAS002165
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	multicellular organismal development Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	receptor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E0VBJ1 [UniParc]. Last modified November 2, 2010. Version 1. Checksum: 95A9C8EC2409C681	FASTA	635	71,117
	10 20 30 40 50 60 MFNFFLFFYF QRIEWHASRP HREICTLKGK SEDDCQNYIR VLAKISQDKL LICGSNAYKP 70 80 90 100 110 120 YCRYYQYKNG EYVVVKDFEG GGLCPYDPDH NSTAVFTDGQ LYAATVADFQ GGDPLIYREP 130 140 150 160 170 180 LRTERSDLKQ LNGPSFVSSV AYEDYVFFFF RETAVEYMNC GKKVYSRVAR VCKHDKGGPH 190 200 210 220 230 240 QFGDRWTSFL KSRLNCSVPG DYPFYFDEIQ SMSEMVEGIY GQRSAQLMYG VFTTPINSIG 250 260 270 280 290 300 GSAVCAFNMQ SILDTFEGPF KEQESMNSNW LPVPITKVPE PRPGQCVNDS RTLPDVSVNF 310 320 330 340 350 360 VKSHTLMDYA VPAFFSRPVL IRISSQYRFT KVAVDPQVRT PDGRAYDVLF IGTDDGKVVK 370 380 390 400 410 420 AVNSASFDSD DKVQTVVLEE IQILPPGIPV KNLYVANGNL IILTDDEIQS IPVHRCDNEN 430 440 450 460 470 480 VTTCRSCVAL QDPYCAWDVL QKKCVASDLT VGWDGDKKRF LQSVTKGENK ACPHTGSPHS 490 500 510 520 530 540 HGRTPGHFME ADLNNEIIIE LDESNVISDT LAGLSHPGAK LPSSQENMVI YTAETLGIAV 550 560 570 580 590 600 ATSILGALVV GFIGGFLFSR RCRGDDYSDM PRFPDNQRHQ LNRLTDSGLN ADLPQHINNK 610 620 630 AINLVLNVPP KNANGKNANS SAENKPIQKI KKTYI

References

[1]

"Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle." Kirkness E.F., Haas B.J., Sun W., Braig H.R., Perotti M.A., Clark J.M., Lee S.H., Robertson H.M., Kennedy R.C., Elhaik E., Gerlach D., Kriventseva E.V., Elsik C.G., Graur D., Hill C.A., Veenstra J.A., Walenz B., Tubio J.M. , Ribeiro J.M., Rozas J., Johnston J.S., Reese J.T., Popadic A., Tojo M., Raoult D., Reed D.L., Tomoyasu Y., Krause E., Mittapalli O., Margam V.M., Li H.M., Meyer J.M., Johnson R.M., Romero-Severson J., Vanzee J.P., Alvarez-Ponce D., Vieira F.G., Aguade M., Guirao-Rico S., Anzola J.M., Yoon K.S., Strycharz J.P., Unger M.F., Christley S., Lobo N.F., Seufferheld M.J., Wang N., Dasch G.A., Struchiner C.J., Madey G., Hannick L.I., Bidwell S., Joardar V., Caler E., Shao R., Barker S.C., Cameron S., Bruggner R.V., Regier A., Johnson J., Viswanathan L., Utterback T.R., Sutton G.G., Lawson D., Waterhouse R.M., Venter J.C., Strausberg R.L., Berenbaum M.R., Collins F.H., Zdobnov E.M., Pittendrigh B.R. Proc. Natl. Acad. Sci. U.S.A. 107:12168-12173(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: USDA.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS235031 Genomic DNA. Translation: EEB10747.1.
RefSeq	XP_002423485.1. XM_002423440.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8231018.
KEGG	phu:Phum_PHUM062540.
VectorBase	PHUM062540. Pediculus humanus.
Organism-specific databases
CTD	8231018.
Phylogenomic databases
KO	K06842.
OMA	LVITERN.
Family and domain databases
Gene3D	2.130.10.10. 1 hit.
InterPro	IPR003659. Plexin-like. IPR016201. Plexin-like_fold. IPR002165. Plexin_repeat. IPR027231. Semaphorin. IPR001627. Semaphorin/CD100_Ag. IPR015943. WD40/YVTN_repeat-like_dom. [Graphical view]
PANTHER	PTHR11036. PTHR11036. 1 hit.
Pfam	PF01437. PSI. 1 hit. PF01403. Sema. 1 hit. [Graphical view]
SMART	SM00423. PSI. 1 hit. SM00630. Sema. 1 hit. [Graphical view]
SUPFAM	SSF103575. Plexin-like_fold. 1 hit. SSF101912. Sema. 1 hit.
PROSITE	PS51004. SEMA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E0VBJ1_PEDHC

Accession

Primary (citable) accession number: E0VBJ1

Entry history

Integrated into UniProtKB/TrEMBL:	November 2, 2010
Last sequence update:	November 2, 2010
Last modified:	March 6, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)