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Protein
Submitted name:

Glutamate decarboxylase, putative

Gene

Phum_PHUM035540

Organism
Pediculus humanus subsp. corporis (Body louse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylase, putativeImported (EC:4.1.1.29Imported)
Gene namesi
ORF Names:Phum_PHUM035540Imported
OrganismiPediculus humanus subsp. corporis (Body louse)Imported
Taxonomic identifieri121224 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraParaneopteraPhthirapteraAnopluraPediculidaePediculus
ProteomesiUP000009046 Componenti: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi121225.PHUM035540-PA.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiE0VAE3.
KOiK01580.
OMAiEYLYTKI.
OrthoDBiEOG7H1JM3.
PhylomeDBiE0VAE3.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E0VAE3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRWEIYPLDK DLFPYVENDA VTKEFLQKLF EILFIFIKET NDRDMKVLNF
60 70 80 90 100
KHPEEMFKNL DLEIPNNGKS LQTLLDDCHT TLKNQVRTGH PRFFNQLSCG
110 120 130 140 150
LDLVSMAGEW LTATANTNMF TYEIAPVFIL METVVMRKMR EIIGPGWENG
160 170 180 190 200
DSILAPGGSI SNLYAFLAAR HKMFPYYKEK GLSAIPGQLV MYTSNQCHYS
210 220 230 240 250
IKSCASVCGL GTDHCVEVPS DERLIIERKA QGHIPFFVNA TAGTTVLGAF
260 270 280 290 300
DPIDEIADVC QKYGCWLHVD VSGLLLSRKY RYPRFQGVER ADSLTWNPHK
310 320 330 340 350
LMGTLLQCST IHFKEDGLLM SCNNMNAAYL FMQDKLYDVK YDTGDKVIQC
360 370 380 390 400
GRHNDIFKLW LQWRAKGDEG FEKHMDRLME LSEYMVKKIK EMSDKYYLIL
410 420 430 440 450
EPEMVNVSFW YIPPRLRNTP HTPEKEKLLG DLCPIIKGRM MQAGTLMVGY
460 470 480
QPDDRRPNFF RNIISSAAVT EKDVDFLLQE IDRLGRDL
Length:488
Mass (Da):56,313
Last modified:November 2, 2010 - v1
Checksum:i18401491FFA0BF27
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS235005 Genomic DNA. Translation: EEB10349.1.
RefSeqiXP_002423087.1. XM_002423042.1.

Genome annotation databases

EnsemblMetazoaiPHUM035540-RA; PHUM035540-PA; PHUM035540.
GeneIDi8232399.
KEGGiphu:Phum_PHUM035540.
VectorBaseiPHUM035540. Pediculus humanus.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS235005 Genomic DNA. Translation: EEB10349.1.
RefSeqiXP_002423087.1. XM_002423042.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi121225.PHUM035540-PA.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiPHUM035540-RA; PHUM035540-PA; PHUM035540.
GeneIDi8232399.
KEGGiphu:Phum_PHUM035540.
VectorBaseiPHUM035540. Pediculus humanus.

Organism-specific databases

CTDi8232399.

Phylogenomic databases

InParanoidiE0VAE3.
KOiK01580.
OMAiEYLYTKI.
OrthoDBiEOG7H1JM3.
PhylomeDBiE0VAE3.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle."
    Kirkness E.F., Haas B.J., Sun W., Braig H.R., Perotti M.A., Clark J.M., Lee S.H., Robertson H.M., Kennedy R.C., Elhaik E., Gerlach D., Kriventseva E.V., Elsik C.G., Graur D., Hill C.A., Veenstra J.A., Walenz B., Tubio J.M.
    , Ribeiro J.M., Rozas J., Johnston J.S., Reese J.T., Popadic A., Tojo M., Raoult D., Reed D.L., Tomoyasu Y., Krause E., Mittapalli O., Margam V.M., Li H.M., Meyer J.M., Johnson R.M., Romero-Severson J., Vanzee J.P., Alvarez-Ponce D., Vieira F.G., Aguade M., Guirao-Rico S., Anzola J.M., Yoon K.S., Strycharz J.P., Unger M.F., Christley S., Lobo N.F., Seufferheld M.J., Wang N., Dasch G.A., Struchiner C.J., Madey G., Hannick L.I., Bidwell S., Joardar V., Caler E., Shao R., Barker S.C., Cameron S., Bruggner R.V., Regier A., Johnson J., Viswanathan L., Utterback T.R., Sutton G.G., Lawson D., Waterhouse R.M., Venter J.C., Strausberg R.L., Berenbaum M.R., Collins F.H., Zdobnov E.M., Pittendrigh B.R.
    Proc. Natl. Acad. Sci. U.S.A. 107:12168-12173(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: USDAImported.

Entry informationi

Entry nameiE0VAE3_PEDHC
AccessioniPrimary (citable) accession number: E0VAE3
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: June 24, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.