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Protein

Alpha-amylase

Gene

amyE

Organism
Bacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciBSUB655816:GCOR-342-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:amyEImported
Ordered Locus Names:BSUW23_01555Imported
OrganismiBacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23)Imported
Taxonomic identifieri655816 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000002233 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE0U1M0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000008732.
KOiK01176.
OMAiAYANYMN.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

E0U1M0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFEKRFKTSL LPLFAGFLLL FHLVLGGSAA ANAETQNTSK ELTAPSIKSG
60 70 80 90 100
TILHAWNWSF NTLKHNMKDI HDAGYTAIQT SPINQVKEGN QGDKSMSNWY
110 120 130 140 150
WLYQPTSYQI GNRYLGTEQE FKEMCAAAEE YGVKVIVDAV INHTTSDYAA
160 170 180 190 200
ISNEIKSIPN WTHGNTQIKN WSDRWDVTQN SLLGLYDWNT QNAQVQSYLK
210 220 230 240 250
RFLERALNDG ADGFRFDAAK HIELPDDGNY GSQFWPNITN TSAEFQYGEI
260 270 280 290 300
LQDSASRDAA YANYMNVTAS NYGHSIRSAL KNRNLSVSNI SHYASDVSVD
310 320 330 340 350
KLVTWVESHD TYANDEEEST WMSDDDIRLG WAVIASRSGS TPLFFSRPEG
360 370 380 390 400
GGNGVRFPGK SQIGDRGSGL FEDQAITAVN RFHNVMDGQP EELSNPNGNN
410 420 430 440 450
QIFMNQRGSH GVVLANAGSS SVTINTSTKL PDGRYDNKAG NGSFQVTDGK
460 470 480 490 500
LTGTLNARSV VVLYPDDIAN APHVFLENVK TGVTHSFNDQ LTITLRADAN
510 520 530 540 550
TTKAVYQINN GQETAFKDGD QLTIGKGDSF GTTYNITLTG TNSDGVTRTQ
560 570 580 590 600
EYRFVKKDPS AAKTIGYQNP NHWGQVNAYI YKHDGGRAIE LAGSWPGRAM
610 620 630 640 650
AKNADGIYTL TLPADTDTTN AKVIFNNGSA QVPGQNQPGF DYVQNGLYND

SGLSGSLPH
Length:659
Mass (Da):72,431
Last modified:November 2, 2010 - v1
Checksum:i504BD3983F9254F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002183 Genomic DNA. Translation: ADM36368.1.
RefSeqiYP_003864677.1. NC_014479.1.

Genome annotation databases

EnsemblBacteriaiADM36368; ADM36368; BSUW23_01555.
KEGGibss:BSUW23_01555.
PATRICi42186611. VBIBacSub57968_0313.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002183 Genomic DNA. Translation: ADM36368.1.
RefSeqiYP_003864677.1. NC_014479.1.

3D structure databases

ProteinModelPortaliE0U1M0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADM36368; ADM36368; BSUW23_01555.
KEGGibss:BSUW23_01555.
PATRICi42186611. VBIBacSub57968_0313.

Phylogenomic databases

HOGENOMiHOG000008732.
KOiK01176.
OMAiAYANYMN.

Enzyme and pathway databases

BioCyciBSUB655816:GCOR-342-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Bacillus subtilis subsp. spizizenii str. W23."
    Zeigler D.R.
    Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23059 / NRRL B-14472 / W23Imported.
  2. Zeigler D.R.
    Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: W23.

Entry informationi

Entry nameiE0U1M0_BACPZ
AccessioniPrimary (citable) accession number: E0U1M0
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: April 1, 2015
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.