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Protein

Superoxide dismutase

Gene

PB2503_06547

Organism
Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciPBER314260:GI0G-1217-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:PB2503_06547Imported
OrganismiParvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087)Imported
Taxonomic identifieri314260 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaParvularculalesParvularculaceaeParvularcula
ProteomesiUP000001302 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE0TI36.
SMRiE0TI36. Positions 2-201.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000013584.
KOiK04564.
OMAiGGGNKLP.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E0TI36-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAISLMDLPY EKTALAPHIS EDTLNYHHGK HHQAYVTKTN DAIKGTALDD
60 70 80 90 100
ADLEAIVKEA KKTANQGLFN NSAQVWNHNI YWQSMSPNGG GAPKAGSKIA
110 120 130 140 150
EAIDKSFGSY DEFKAKFKDA GGTQFGSGWA WLVAKKDGSL EILKTLNADC
160 170 180 190 200
PLTDESVTTL LTMDVWEHAY YLDYQNARPD YMTHFLDNLV NWDFAEERLA

AA
Length:202
Mass (Da):22,449
Last modified:November 2, 2010 - v1
Checksum:i82D494EB917C0A90
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002156 Genomic DNA. Translation: ADM09375.1.
RefSeqiYP_003854517.1. NC_014414.1.

Genome annotation databases

EnsemblBacteriaiADM09375; ADM09375; PB2503_06547.
KEGGipbr:PB2503_06547.
PATRICi42426597. VBIParBer119301_1237.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002156 Genomic DNA. Translation: ADM09375.1.
RefSeqiYP_003854517.1. NC_014414.1.

3D structure databases

ProteinModelPortaliE0TI36.
SMRiE0TI36. Positions 2-201.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADM09375; ADM09375; PB2503_06547.
KEGGipbr:PB2503_06547.
PATRICi42426597. VBIParBer119301_1237.

Phylogenomic databases

HOGENOMiHOG000013584.
KOiK04564.
OMAiGGGNKLP.

Enzyme and pathway databases

BioCyciPBER314260:GI0G-1217-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Parvularcula bermudensis HTCC2503."
    Kang D.-M., Oh H.-M., Cho J.-C.
    Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-594 / HTCC2503 / KCTC 12087Imported.

Entry informationi

Entry nameiE0TI36_PARBH
AccessioniPrimary (citable) accession number: E0TI36
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: April 1, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.