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Protein

Superoxide dismutase

Gene

PB2503_06547

Organism
Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:PB2503_06547Imported
OrganismiParvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087)Imported
Taxonomic identifieri314260 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaParvularculalesParvularculaceaeParvularcula
Proteomesi
  • UP000001302 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi314260.PB2503_06547.

Structurei

3D structure databases

ProteinModelPortaliE0TI36.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 86Sod_Fe_NInterPro annotationAdd BLAST83
Domaini98 – 198Sod_Fe_CInterPro annotationAdd BLAST101

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4. Bacteria.
COG0605. LUCA.
HOGENOMiHOG000013584.
KOiK04564.
OMAiDSLINWD.
OrthoDBiPOG091H03Q7.

Family and domain databases

InterProiView protein in InterPro
IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
PfamiView protein in Pfam
PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiView protein in PROSITE
PS00088. SOD_MN. 1 hit.

Sequencei

Sequence statusi: Complete.

E0TI36-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAISLMDLPY EKTALAPHIS EDTLNYHHGK HHQAYVTKTN DAIKGTALDD
60 70 80 90 100
ADLEAIVKEA KKTANQGLFN NSAQVWNHNI YWQSMSPNGG GAPKAGSKIA
110 120 130 140 150
EAIDKSFGSY DEFKAKFKDA GGTQFGSGWA WLVAKKDGSL EILKTLNADC
160 170 180 190 200
PLTDESVTTL LTMDVWEHAY YLDYQNARPD YMTHFLDNLV NWDFAEERLA

AA
Length:202
Mass (Da):22,449
Last modified:November 2, 2010 - v1
Checksum:i82D494EB917C0A90
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002156 Genomic DNA. Translation: ADM09375.1.
RefSeqiWP_013300349.1. NC_014414.1.

Genome annotation databases

EnsemblBacteriaiADM09375; ADM09375; PB2503_06547.
KEGGipbr:PB2503_06547.
PATRICi42426597. VBIParBer119301_1237.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002156 Genomic DNA. Translation: ADM09375.1.
RefSeqiWP_013300349.1. NC_014414.1.

3D structure databases

ProteinModelPortaliE0TI36.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi314260.PB2503_06547.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADM09375; ADM09375; PB2503_06547.
KEGGipbr:PB2503_06547.
PATRICi42426597. VBIParBer119301_1237.

Phylogenomic databases

eggNOGiENOG4105CK4. Bacteria.
COG0605. LUCA.
HOGENOMiHOG000013584.
KOiK04564.
OMAiDSLINWD.
OrthoDBiPOG091H03Q7.

Family and domain databases

InterProiView protein in InterPro
IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
PfamiView protein in Pfam
PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiView protein in PROSITE
PS00088. SOD_MN. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiE0TI36_PARBH
AccessioniPrimary (citable) accession number: E0TI36
Entry historyiIntegrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: February 15, 2017
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.