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Protein
Submitted name:

Superoxide dismutase, Cu-Zn

Gene

PB2503_10229

Organism
Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase, Cu-ZnImported
Gene namesi
Ordered Locus Names:PB2503_10229Imported
OrganismiParvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087)Imported
Taxonomic identifieri314260 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaParvularculalesParvularculaceaeParvularcula
Proteomesi
  • UP000001302 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500314063921 – 197Sequence analysisAdd BLAST177

Interactioni

Protein-protein interaction databases

STRINGi314260.PB2503_10229.

Structurei

3D structure databases

ProteinModelPortaliE0TFH3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini66 – 193Sod_CuInterPro annotationAdd BLAST128

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4108Z7T. Bacteria.
COG2032. LUCA.
HOGENOMiHOG000263448.
KOiK04565.
OMAiAFHVHET.
OrthoDBiPOG091H05EB.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR024134. SOD_Cu/Zn_/chaperone.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERiPTHR10003. PTHR10003. 1 hit.
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

E0TFH3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPPYRPLRLL GASLALPLVA CGNGTPPPSP ESEAASPAMA DHGPLAAAPG
60 70 80 90 100
ADALAADFID PSGARIGTAF ATPGPNGMVI RVDLEGLTQG FHAIHAHQVG
110 120 130 140 150
DCSDPDAGFQ ASGGHINPAG VPHGFLNATG RSEADMPNIY AHGTGHLRAE
160 170 180 190
LFAEGLTADL GLDDDGFALI VHENPDDHET QPIGGAGGRV ACAAFTN
Length:197
Mass (Da):19,849
Last modified:November 2, 2010 - v1
Checksum:i07D43C8465996988
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002156 Genomic DNA. Translation: ADM10097.1.
RefSeqiWP_013301071.1. NC_014414.1.

Genome annotation databases

EnsemblBacteriaiADM10097; ADM10097; PB2503_10229.
KEGGipbr:PB2503_10229.
PATRICi42428122. VBIParBer119301_1993.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002156 Genomic DNA. Translation: ADM10097.1.
RefSeqiWP_013301071.1. NC_014414.1.

3D structure databases

ProteinModelPortaliE0TFH3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi314260.PB2503_10229.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADM10097; ADM10097; PB2503_10229.
KEGGipbr:PB2503_10229.
PATRICi42428122. VBIParBer119301_1993.

Phylogenomic databases

eggNOGiENOG4108Z7T. Bacteria.
COG2032. LUCA.
HOGENOMiHOG000263448.
KOiK04565.
OMAiAFHVHET.
OrthoDBiPOG091H05EB.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR024134. SOD_Cu/Zn_/chaperone.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERiPTHR10003. PTHR10003. 1 hit.
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiE0TFH3_PARBH
AccessioniPrimary (citable) accession number: E0TFH3
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: November 2, 2016
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.