E0TF61 (E0TF61_PARBH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L20 HAMAP-Rule MF_00382 RuleBase RU000560

Gene names

Name:	rplT HAMAP-Rule MF_00382
Ordered Locus Names:	PB2503_04522 EMBL ADM08979.1

Organism

Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) [Complete proteome] [HAMAP]

Taxonomic identifier

314260 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Parvularculales › Parvularculaceae › Parvularcula › Parvularcula bermudensis

Protein attributes

Sequence length	119 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity. HAMAP-Rule MF_00382 RuleBase RU000560
Sequence similarities	Belongs to the ribosomal protein L20P family. HAMAP-Rule MF_00382 RuleBase RU000560

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP-Rule MF_00382 RuleBase RU000560
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP-Rule MF_00382 RuleBase RU000560 EMBL ADM08979.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ribosomal large subunit assembly Inferred from electronic annotation. Source: HAMAP translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E0TF61 [UniParc]. Last modified November 2, 2010. Version 1. Checksum: 8FF31954BA090047	FASTA	119	13,489
	10 20 30 40 50 60 MSRVKTGTVR KARHKKIIGQ AKGYYGARHR LFRTANQAVE KAGQYAYRDR KARKREFRRL 70 80 90 100 110 WIQRINAAVR EHGLTYSVFM NGLAKAGIEV DRKMLADLAA REPESFAAIV EKAKGALAA

References

[1]	"Genome sequence of Parvularcula bermudensis HTCC2503." Kang D.-M., Oh H.-M., Cho J.-C. Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-594 / HTCC2503 / KCTC 12087.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002156 Genomic DNA. Translation: ADM08979.1.
RefSeq	YP_003854121.1. NC_014414.1.
3D structure databases
ProteinModelPortal	E0TF61.
SMR	E0TF61. Positions 3-116.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADM08979; ADM08979; PB2503_04522.
GeneID	9709145.
KEGG	pbr:PB2503_04522.
PATRIC	42425753. VBIParBer119301_0820.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000035046.
KO	K02887.
Enzyme and pathway databases
BioCyc	PBER314260:GI0G-800-MONOMER.
Family and domain databases
HAMAP	MF_00382. Ribosomal_L20.
InterPro	IPR005813. Ribosomal_L20. [Graphical view]
PANTHER	PTHR10986. PTHR10986. 1 hit.
Pfam	PF00453. Ribosomal_L20. 1 hit. [Graphical view]
PRINTS	PR00062. RIBOSOMALL20.
TIGRFAMs	TIGR01032. rplT_bact. 1 hit.
PROSITE	PS00937. RIBOSOMAL_L20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E0TF61_PARBH

Accession

Primary (citable) accession number: E0TF61

Entry history

Integrated into UniProtKB/TrEMBL:	November 2, 2010
Last sequence update:	November 2, 2010
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)