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E0TBX1 (E0TBX1_PARBH) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length537 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
E0TBX1 [UniParc].

Last modified November 2, 2010. Version 1.
Checksum: 22B3EEDC55E3471D

FASTA53760,868
        10         20         30         40         50         60 
MNRFAALLES LIYTPSRNGK IRLLTEYFAS TPDPDRGWAV AAMTRDLDIK SVKPAMIKTL 

        70         80         90        100        110        120 
VEERVDPVLF GLSYDYVGDL AETVSLIWPG QEQRNYIPTL TDIVETLGEI SRQEAPSVVA 

       130        140        150        160        170        180 
DWFDALSPPA RWALIKLITG GLRIGVAARL VKLALAEFGG QPVQDIEELW HGLEAPYRDL 

       190        200        210        220        230        240 
FAWLEGRSPR PAQAAKAPFR PVMLAHPVEE KDQPKIDLTE MMAEWKWDGI RVQTVVEDGV 

       250        260        270        280        290        300 
KRLYTRTGDD ISGTFPDLLA SLNEEVAIDG ELLIFDPAIT DRFVVRPFND LQQRLNRKVV 

       310        320        330        340        350        360 
SKKLLEESPA FIRAYDLLWA RGEDLRPLPF SARRAHLEEI SQQGAFPRLD LSPVIPLSSW 

       370        380        390        400        410        420 
EALADLRANP PEDAIEGVML KRADAPYVPG RPKGQWWKWK REPFLVDAVL MYAQRGHGKR 

       430        440        450        460        470        480 
SSFYSDYTFG VWRTGKDGEE LVPVGKAYHG FTDLELKKID KFVRDHTIDR FGPVRAVRAT 

       490        500        510        520        530 
REEGLVFEVA FEGLQRSSRH KSGIAMRFPR INRLRWDKPT AEADRLETLE AMLPATA 

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References

[1]"Genome sequence of Parvularcula bermudensis HTCC2503."
Kang D.-M., Oh H.-M., Cho J.-C.
Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-594 / HTCC2503 / KCTC 12087.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002156 Genomic DNA. Translation: ADM08464.1.
RefSeqYP_003853605.1. NC_014414.1.

3D structure databases

ProteinModelPortalE0TBX1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADM08464; ADM08464; PB2503_01927.
GeneID9708629.
KEGGpbr:PB2503_01927.
PATRIC42424691. VBIParBer119301_0291.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000036007.
KOK01971.
OMANRHKSGV.

Enzyme and pathway databases

BioCycPBER314260:GI0G-293-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE0TBX1_PARBH
AccessionPrimary (citable) accession number: E0TBX1
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: May 14, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)