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Protein

Glutamate decarboxylase

Gene

ETAF_2604

Organism
Edwardsiella tarda (strain FL6-60)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciETAR718251:GLCN-2689-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:ETAF_2604Imported
OrganismiEdwardsiella tarda (strain FL6-60)Imported
Taxonomic identifieri718251 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEdwardsiella
ProteomesiUP000002230: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE0T6X6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E0T6X6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKGTDTRGG YLDSRFGSEA IRTAAEAHHF PQGEMREDIA FQVINDELFL
60 70 80 90 100
DGNARQNLAT FCQTWDDDYV HRLMDISINK NWIDKEEYPQ SAAIDLRCVN
110 120 130 140 150
MVADLWHAPR PADGQAVGTN TIGSSEACML GGMAMKWRWR AKRLAQGKSV
160 170 180 190 200
DKPNMVCGPV QVCWHKFARY WDVELREIPM APGKLFMDPE RMIAACDENT
210 220 230 240 250
IGVVPTFGVT YTGNYEMPDV LHKALDDLQA RTGLDIDMHV DAASGGFLAP
260 270 280 290 300
FCAPDIVWDF RLPRVKSISA SGHKFGLAPL GCGWVVWRDA ASLPDDLIFK
310 320 330 340 350
VDYLGGQVGT FAINFSRPAG QVIAQYYEFL RLGREGYTKV HTASYQVAQF
360 370 380 390 400
LAAEIAKLGP YEFICSGDPQ QGIPAVCFRI PAGKALGYSL YDLSERLRLR
410 420 430 440 450
GWQVPAFALN GEMSDVVVMR IMCRRGFEMD FAQLLMEDFR AALAYLKAHP
460
AVANVAHQNS FKHS
Length:464
Mass (Da):51,801
Last modified:November 2, 2010 - v1
Checksum:i4C91197AC5608011
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002154 Genomic DNA. Translation: ADM42706.1.
RefSeqiWP_012849691.1. NC_017309.1.
YP_005700198.1. NC_017309.1.

Genome annotation databases

EnsemblBacteriaiADM42706; ADM42706; ETAF_2604.
GeneIDi12857632.
KEGGietd:ETAF_2604.
PATRICi42919989. VBIEdwTar147555_2705.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002154 Genomic DNA. Translation: ADM42706.1.
RefSeqiWP_012849691.1. NC_017309.1.
YP_005700198.1. NC_017309.1.

3D structure databases

ProteinModelPortaliE0T6X6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADM42706; ADM42706; ETAF_2604.
GeneIDi12857632.
KEGGietd:ETAF_2604.
PATRICi42919989. VBIEdwTar147555_2705.

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.

Enzyme and pathway databases

BioCyciETAR718251:GLCN-2689-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome comparisons of Edwardsiella bacteria analysed using deep sequencing technology."
    van Soest J.J., Henkel C.V., Jansen H.J., van den Hondel C.A.M.J.J., Bloemberg G.V., Meijer A.H., Spaink H.P.
    Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FL6-60Imported.

Entry informationi

Entry nameiE0T6X6_EDWTF
AccessioniPrimary (citable) accession number: E0T6X6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: February 4, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.