E0SNR8 (E0SNR8_IGNAA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA-binding S1 domain-containing protein EMBL ADM27864.1

Gene names

Ordered Locus Names:

Igag_1050

Organism

Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) [Complete proteome] [HAMAP] EMBL ADM27864.1

Taxonomic identifier

583356 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Crenarchaeota › Thermoprotei › Desulfurococcales › Desulfurococcaceae › Ignisphaera › Ignisphaera aggregans

Protein attributes

Sequence length	187 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	exosome (RNase complex) Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E0SNR8 [UniParc]. Last modified November 2, 2010. Version 1. Checksum: D04A01ADCF2B0A22	FASTA	187	20,913
	10 20 30 40 50 60 MSLPPNSIVL PGEKLCVEEE YMPSIGTYSE EGIVRAAIIG RVQYDIINRR IYIKSIKSPV 70 80 90 100 110 120 IPKAGDIVIG VVEQMRDELA TINIIGYDTN NLFKHSFTGI LHISQASETR IPTLYDVIRV 130 140 150 160 170 180 GDIIRAKVLN NYIPILLSIK EPRLGVIQAY CSRCGSPLIK SGDKLRCSFC GNIENRKIAF DYILRGK

References

[1]

"Complete genome sequence of Ignisphaera aggregans type strain (AQ1.S1)." Goker M., Held B., Lapidus A., Nolan M., Spring S., Yasawong M., Lucas S., Glavina Del Rio T., Tice H., Cheng J., Goodwin L., Tapia R., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A. , Palaniappan K., Brambilla E., Land M., Hauser L., Chang Y., Jeffries C., Brettin T., Detter J., Han C., Rohde M., Sikorski J., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H. Stand. Genomic Sci. 3:66-75(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 17230 / JCM 13409 / AQ1.S1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002098 Genomic DNA. Translation: ADM27864.1.
RefSeq	YP_003859744.1. NC_014471.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADM27864; ADM27864; Igag_1050.
GeneID	9716366.
KEGG	iag:Igag_1050.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000222781.
KO	K07573.
OMA	CGNVETR.
Enzyme and pathway databases
BioCyc	IAGG583356:GHAH-1070-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR019495. EXOSC1. IPR025721. Exosome_cplx_N_dom. IPR012340. NA-bd_OB-fold. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR022967. RNA-binding_domain_S1. [Graphical view]
Pfam	PF14382. ECR1_N. 1 hit. PF10447. EXOSC1. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50126. S1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E0SNR8_IGNAA

Accession

Primary (citable) accession number: E0SNR8

Entry history

Integrated into UniProtKB/TrEMBL:	November 2, 2010
Last sequence update:	November 2, 2010
Last modified:	May 29, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)