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E0SJQ4

- E0SJQ4_DICD3

UniProt

E0SJQ4 - E0SJQ4_DICD3

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Protein
Submitted name:

Gamma-aminobutyric-acid receptor subunit beta-1

Gene
Dda3937_00520
Organism
Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937))
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. extracellular ligand-gated ion channel activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Enzyme and pathway databases

BioCyciDDAD198628:GHFQ-4244-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Gamma-aminobutyric-acid receptor subunit beta-1Imported
Gene namesi
Ordered Locus Names:Dda3937_00520Imported
OrganismiDickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937))Imported
Taxonomic identifieri198628 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya
ProteomesiUP000006859: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

DIPiDIP-60036N.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2YN6X-ray3.31A/B/C/D/E22-343[»]
3RQUX-ray3.09A/B/C/D/E/F/G/H/I/J22-343[»]
3RQWX-ray2.91A/B/C/D/E/F/G/H/I/J22-343[»]
3UQ4X-ray3.50A/B/C/D/E/F/G/H/I/J22-343[»]
3UQ5X-ray4.20A/B/C/D/E/F/G/H/I/J22-343[»]
3UQ7X-ray3.80A/B/C/D/E/F/G/H/I/J22-343[»]

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000157201.
OMAiFTYEASF.

Family and domain databases

Gene3Di2.70.170.10. 1 hit.
InterProiIPR006202. Neur_chan_lig-bd.
IPR006201. Neur_channel.
IPR006029. Neurotrans-gated_channel_TM.
[Graphical view]
PANTHERiPTHR18945. PTHR18945. 1 hit.
PfamiPF02931. Neur_chan_LBD. 1 hit.
[Graphical view]
SUPFAMiSSF63712. SSF63712. 1 hit.
SSF90112. SSF90112. 1 hit.

Sequencei

Sequence statusi: Complete.

E0SJQ4-1 [UniParc]FASTAAdd to Basket

« Hide

MRILWSCCGL VLLLLGLPAW SAPADNAADA RPVDVSVSIF INKIYGVNTL    50
EQTYKVDGYI VAQWTGKPRK TPGDKPLIVE NTQIERWINN GLWVPALEFI 100
NVVGSPDTGN KRLMLFPDGR VIYNARFLGS FSNDMDFRLF PFDRQQFVLE 150
LEPFSYNNQQ LRFSDIQVYT ENIDNEEIDE WWIRGKASTH ISDIRYDHLS 200
SVQPNQNEFS RITVRIDAVR NPSYYLWSFI LPLGLIIAAS WSVFWLESFS 250
ERLQTSFTLM LTVVAYAFYT SNILPRLPYT TVIDQMIIAG YGSIFAAILL 300
IIFAHHRQAN GVEDDLLIQR CRLAFPLGFL AIGCVLVIRG ITL 343
Length:343
Mass (Da):39,175
Last modified:November 2, 2010 - v1
Checksum:i90663D9956C5C82E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002038 Genomic DNA. Translation: ADN00343.1.
RefSeqiYP_003884899.1. NC_014500.1.

Genome annotation databases

EnsemblBacteriaiADN00343; ADN00343; Dda3937_00520.
GeneIDi9735629.
KEGGiddd:Dda3937_00520.
PATRICi42320599. VBIDicDad25310_4084.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002038 Genomic DNA. Translation: ADN00343.1 .
RefSeqi YP_003884899.1. NC_014500.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2YN6 X-ray 3.31 A/B/C/D/E 22-343 [» ]
3RQU X-ray 3.09 A/B/C/D/E/F/G/H/I/J 22-343 [» ]
3RQW X-ray 2.91 A/B/C/D/E/F/G/H/I/J 22-343 [» ]
3UQ4 X-ray 3.50 A/B/C/D/E/F/G/H/I/J 22-343 [» ]
3UQ5 X-ray 4.20 A/B/C/D/E/F/G/H/I/J 22-343 [» ]
3UQ7 X-ray 3.80 A/B/C/D/E/F/G/H/I/J 22-343 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-60036N.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADN00343 ; ADN00343 ; Dda3937_00520 .
GeneIDi 9735629.
KEGGi ddd:Dda3937_00520.
PATRICi 42320599. VBIDicDad25310_4084.

Phylogenomic databases

HOGENOMi HOG000157201.
OMAi FTYEASF.

Enzyme and pathway databases

BioCyci DDAD198628:GHFQ-4244-MONOMER.

Family and domain databases

Gene3Di 2.70.170.10. 1 hit.
InterProi IPR006202. Neur_chan_lig-bd.
IPR006201. Neur_channel.
IPR006029. Neurotrans-gated_channel_TM.
[Graphical view ]
PANTHERi PTHR18945. PTHR18945. 1 hit.
Pfami PF02931. Neur_chan_LBD. 1 hit.
[Graphical view ]
SUPFAMi SSF63712. SSF63712. 1 hit.
SSF90112. SSF90112. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 3937Imported.
  2. "Structure of the pentameric ligand-gated ion channel ELIC cocrystallized with its competitive antagonist acetylcholine."
    Pan J., Chen Q., Willenbring D., Yoshida K., Tillman T., Kashlan O.B., Cohen A., Kong X.P., Xu Y., Tang P.
    Nat. Commun. 3:714-714(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.91 ANGSTROMS) OF 22-343.
  3. "Inhibition of the prokaryotic pentameric ligand-gated ion channel ELIC by divalent cations."
    Zimmermann I., Marabelli A., Bertozzi C., Sivilotti L.G., Dutzler R.
    PLoS Biol. 10:e1001429-e1001429(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.31 ANGSTROMS) OF 22-343.
  4. "Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals."
    Gonzalez-Gutierrez G., Lukk T., Agarwal V., Papke D., Nair S.K., Grosman C.
    Proc. Natl. Acad. Sci. U.S.A. 109:6331-6336(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.50 ANGSTROMS) OF 22-343.

Entry informationi

Entry nameiE0SJQ4_DICD3
AccessioniPrimary (citable) accession number: E0SJQ4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome

External Data

Dasty 3

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