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E0SJQ4 (E0SJQ4_DICD3) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Dda3937_00520 EMBL ADN00343.1
OrganismDickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)) [Complete proteome] [HAMAP] EMBL ADN00343.1
Taxonomic identifier198628 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya

Protein attributes

Sequence length343 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
E0SJQ4 [UniParc].

Last modified November 2, 2010. Version 1.
Checksum: 90663D9956C5C82E

FASTA34339,175
        10         20         30         40         50         60 
MRILWSCCGL VLLLLGLPAW SAPADNAADA RPVDVSVSIF INKIYGVNTL EQTYKVDGYI 

        70         80         90        100        110        120 
VAQWTGKPRK TPGDKPLIVE NTQIERWINN GLWVPALEFI NVVGSPDTGN KRLMLFPDGR 

       130        140        150        160        170        180 
VIYNARFLGS FSNDMDFRLF PFDRQQFVLE LEPFSYNNQQ LRFSDIQVYT ENIDNEEIDE 

       190        200        210        220        230        240 
WWIRGKASTH ISDIRYDHLS SVQPNQNEFS RITVRIDAVR NPSYYLWSFI LPLGLIIAAS 

       250        260        270        280        290        300 
WSVFWLESFS ERLQTSFTLM LTVVAYAFYT SNILPRLPYT TVIDQMIIAG YGSIFAAILL 

       310        320        330        340 
IIFAHHRQAN GVEDDLLIQR CRLAFPLGFL AIGCVLVIRG ITL 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937."
Glasner J.D., Yang C.H., Reverchon S., Hugouvieux-Cotte-Pattat N., Condemine G., Bohin J.P., Van Gijsegem F., Yang S., Franza T., Expert D., Plunkett G.III., San Francisco M.J., Charkowski A.O., Py B., Bell K., Rauscher L., Rodriguez-Palenzuela P., Toussaint A. expand/collapse author list , Holeva M.C., He S.Y., Douet V., Boccara M., Blanco C., Toth I., Anderson B.D., Biehl B.S., Mau B., Flynn S.M., Barras F., Lindeberg M., Birch P.R., Tsuyumu S., Shi X., Hibbing M., Yap M.N., Carpentier M., Dassa E., Umehara M., Kim J.F., Rusch M., Soni P., Mayhew G.F., Fouts D.E., Gill S.R., Blattner F.R., Keen N.T., Perna N.T.
J. Bacteriol. 193:2076-2077(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 3937 EMBL ADN00343.1.
[2]"Structure of the pentameric ligand-gated ion channel ELIC cocrystallized with its competitive antagonist acetylcholine."
Pan J., Chen Q., Willenbring D., Yoshida K., Tillman T., Kashlan O.B., Cohen A., Kong X.P., Xu Y., Tang P.
Nat. Commun. 3:714-714(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.91 ANGSTROMS) OF 22-343.
[3]"Inhibition of the prokaryotic pentameric ligand-gated ion channel ELIC by divalent cations."
Zimmermann I., Marabelli A., Bertozzi C., Sivilotti L.G., Dutzler R.
PLoS Biol. 10:e1001429-e1001429(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.31 ANGSTROMS) OF 22-343.
[4]"Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals."
Gonzalez-Gutierrez G., Lukk T., Agarwal V., Papke D., Nair S.K., Grosman C.
Proc. Natl. Acad. Sci. U.S.A. 109:6331-6336(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.50 ANGSTROMS) OF 22-343.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002038 Genomic DNA. Translation: ADN00343.1.
RefSeqYP_003884899.1. NC_014500.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2YN6X-ray3.31A/B/C/D/E22-343[»]
3RQUX-ray3.09A/B/C/D/E/F/G/H/I/J22-343[»]
3RQWX-ray2.91A/B/C/D/E/F/G/H/I/J22-343[»]
3UQ4X-ray3.50A/B/C/D/E/F/G/H/I/J22-343[»]
3UQ5X-ray4.20A/B/C/D/E/F/G/H/I/J22-343[»]
3UQ7X-ray3.80A/B/C/D/E/F/G/H/I/J22-343[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-60036N.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADN00343; ADN00343; Dda3937_00520.
GeneID9735629.
KEGGddd:Dda3937_00520.
PATRIC42320599. VBIDicDad25310_4084.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000157201.
OMAISFTYEA.

Enzyme and pathway databases

BioCycDDAD198628:GHFQ-4244-MONOMER.

Family and domain databases

Gene3D2.70.170.10. 1 hit.
InterProIPR006202. Neur_chan_lig-bd.
IPR006201. Neur_channel.
IPR006029. Neurotrans-gated_channel_TM.
[Graphical view]
PANTHERPTHR18945. PTHR18945. 1 hit.
PfamPF02931. Neur_chan_LBD. 1 hit.
[Graphical view]
SUPFAMSSF63712. SSF63712. 1 hit.
SSF90112. SSF90112. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE0SJQ4_DICD3
AccessionPrimary (citable) accession number: E0SJQ4
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: April 16, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)