E0SIP4 (E0SIP4_DICD3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Lysozyme RuleBase RU003788
EC=3.2.1.17 RuleBase RU003788

Gene names

Ordered Locus Names:

Dda3937_02796

Organism

Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)) [Complete proteome] [HAMAP] EMBL ADM99103.1

Taxonomic identifier

198628 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Dickeya › Dickeya dadantii

Protein attributes

Sequence length	162 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. RuleBase RU003788
Sequence similarities	Belongs to the glycosyl hydrolase 24 family. RuleBase RU003788

Ontologies

Keywords
Molecular function	Antimicrobial Bacteriolytic enzyme RuleBase RU003788 Glycosidase RuleBase RU003788 EMBL ADM99103.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro cytolysis Inferred from electronic annotation. Source: UniProtKB-KW defense response to bacterium Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	lysozyme activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E0SIP4 [UniParc]. Last modified November 2, 2010. Version 1. Checksum: 7CFF513BFEE81FF0	FASTA	162	18,088
	10 20 30 40 50 60 MLNNPNLIAF LDMLAFSEGT STHPLTGNRG YDVIVTGIDG KPEIFTDYRD HPFANGRPGK 70 80 90 100 110 120 IFNKQGQRST AAGRYQQLYR YWPAYKTQLA LPDFGPDSQD TLAIQLIREQ RALDDIMQGR 130 140 150 160 LTSAITRCNN IWASLPGAGY GQREHNAERL IAVYRQAGGK LA

References

[1]

"Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937." Glasner J.D., Yang C.H., Reverchon S., Hugouvieux-Cotte-Pattat N., Condemine G., Bohin J.P., Van Gijsegem F., Yang S., Franza T., Expert D., Plunkett G. III, San Francisco M.J., Charkowski A.O., Py B., Bell K., Rauscher L., Rodriguez-Palenzuela P., Toussaint A. , Holeva M.C., He S.Y., Douet V., Boccara M., Blanco C., Toth I., Anderson B.D., Biehl B.S., Mau B., Flynn S.M., Barras F., Lindeberg M., Birch P.R., Tsuyumu S., Shi X., Hibbing M., Yap M.N., Carpentier M., Dassa E., Umehara M., Kim J.F., Rusch M., Soni P., Mayhew G.F., Fouts D.E., Gill S.R., Blattner F.R., Keen N.T., Perna N.T. J. Bacteriol. 193:2076-2077(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 3937.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002038 Genomic DNA. Translation: ADM99103.1.
RefSeq	YP_003883660.1. NC_014500.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADM99103; ADM99103; Dda3937_02796.
GeneID	9734345.
KEGG	ddd:Dda3937_02796.
PATRIC	42318143. VBIDicDad25310_2892.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000118549.
OMA	CNNIWAS.
Enzyme and pathway databases
BioCyc	DDAD198628:GHFQ-2959-MONOMER.
Family and domain databases
InterPro	IPR002196. Glyco_hydro_24. IPR023346. Lysozyme-like_dom. [Graphical view]
Pfam	PF00959. Phage_lysozyme. 1 hit. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E0SIP4_DICD3

Accession

Primary (citable) accession number: E0SIP4

Entry history

Integrated into UniProtKB/TrEMBL:	November 2, 2010
Last sequence update:	November 2, 2010
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)