E0SEU7 (E0SEU7_DICD3) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 24.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Leucine--tRNA ligase HAMAP-Rule MF_00049 EC=6.1.1.4 HAMAP-Rule MF_00049 Alternative name(s): Leucyl-tRNA synthetase HAMAP-Rule MF_00049 | ||||
| Gene names |
| ||||
| Organism | Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)) [Complete proteome] [HAMAP] EMBL ADM97509.1 | ||||
| Taxonomic identifier | 198628 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Dickeya › ![]() |
Protein attributes
| Sequence length | 860 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | ATP + L-leucine + tRNA(Leu) = AMP + diphosphate + L-leucyl-tRNA(Leu). HAMAP-Rule MF_00049 |
| Subcellular location | Cytoplasm By similarity HAMAP-Rule MF_00049. |
| Sequence similarities | Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00049 RuleBase RU003489 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Protein biosynthesis HAMAP-Rule MF_00049 RuleBase RU003489 |
| Cellular component | Cytoplasm HAMAP-Rule MF_00049 |
| Ligand | ATP-binding HAMAP-Rule MF_00049 RuleBase RU003489 Nucleotide-binding |
| Molecular function | Aminoacyl-tRNA synthetase HAMAP-Rule MF_00049 RuleBase RU003489 EMBL ADM97509.1 Ligase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | leucyl-tRNA aminoacylation Inferred from electronic annotation. Source: HAMAP regulation of translational fidelityInferred from electronic annotation. Source: GOC |
| Cellular_component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | ATP binding Inferred from electronic annotation. Source: HAMAP aminoacyl-tRNA editing activityInferred from electronic annotation. Source: InterPro leucine-tRNA ligase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Motif | 42 – 52 | 11 | "HIGH" region By similarity HAMAP-Rule MF_00049 | ||||||
| Motif | 619 – 623 | 5 | "KMSKS" region By similarity HAMAP-Rule MF_00049 | ||||||
Sites | |||||||||
| Binding site | 622 | 1 | ATP By similarity HAMAP-Rule MF_00049 | ||||||
Sequences
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References
| [1] | "Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937." Glasner J.D., Yang C.H., Reverchon S., Hugouvieux-Cotte-Pattat N., Condemine G., Bohin J.P., Van Gijsegem F., Yang S., Franza T., Expert D., Plunkett G. III, San Francisco M.J., Charkowski A.O., Py B., Bell K., Rauscher L., Rodriguez-Palenzuela P., Toussaint A. Perna N.T.J. Bacteriol. 193:2076-2077(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 3937. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP002038 Genomic DNA. Translation: ADM97509.1. |
| RefSeq | YP_003882066.1. NC_014500.1. |
3D structure databases | |
| ProteinModelPortal | E0SEU7. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ADM97509; ADM97509; Dda3937_02477. |
| GeneID | 9732719. |
| KEGG | ddd:Dda3937_02477. |
| PATRIC | 42314954. VBIDicDad25310_1308. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000200747. |
| KO | K01869. |
| OMA | GWPEQVK. |
Enzyme and pathway databases | |
| BioCyc | DDAD198628:GHFQ-1333-MONOMER. |
Family and domain databases | |
| Gene3D | 3.40.50.620. 3 hits. 3.90.740.10. 1 hit. |
| HAMAP | MF_00049_B. Leu_tRNA_synth_B. |
| InterPro | IPR001412. aa-tRNA-synth_I_CS. IPR002300. aa-tRNA-synth_Ia. IPR002302. Leu-tRNA-ligase_bac/mito. IPR025709. Leu_tRNA-synth_edit. IPR014729. Rossmann-like_a/b/a_fold. IPR009080. tRNAsynth_1a_anticodon-bd. IPR013155. V/L/I-tRNA-synth_anticodon-bd. IPR009008. Val/Leu/Ile-tRNA-synth_edit. [Graphical view] |
| PANTHER | PTHR11946:SF7. PTHR11946:SF7. 1 hit. |
| Pfam | PF08264. Anticodon_1. 1 hit. PF00133. tRNA-synt_1. 3 hits. PF13603. tRNA-synt_1_2. 1 hit. [Graphical view] |
| PRINTS | PR00985. TRNASYNTHLEU. |
| SUPFAM | SSF47323. tRNAsyn_1a_bind. 1 hit. SSF50677. ValRS_IleRS_edit. 1 hit. |
| TIGRFAMs | TIGR00396. leuS_bact. 1 hit. |
| PROSITE | PS00178. AA_TRNA_LIGASE_I. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | E0SEU7_DICD3 | ||||||||
| Accession | Primary (citable) accession number: E0SEU7 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
