Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Alpha-amylase Amy13G

Gene

amy13G

Organism
Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) (Clostridium proteoclasticum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciBPRO515622:GHKV-750-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase Amy13GImported
Gene namesi
Name:amy13GImported
Ordered Locus Names:bpr_I0729Imported
OrganismiButyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) (Clostridium proteoclasticum)Imported
Taxonomic identifieri515622 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesLachnospiraceaeButyrivibrio
ProteomesiUP000001299 Componenti: Chromosome 1

PTM / Processingi

Proteomic databases

PRIDEiE0S0Z7.

Interactioni

Protein-protein interaction databases

STRINGi515622.bpr_I0729.

Structurei

3D structure databases

ProteinModelPortaliE0S0Z7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000220640.
KOiK05343.
OMAiHTSEEHE.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

E0S0Z7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSWLKDAVF YEIYPQTFRD TNGDGIGDIN GIIEKLDYIK DLGCNALWIN
60 70 80 90 100
PCYDSPFKDA GYDVRDYKKV APRYGTNEDL YRLFLIAHDK GIHVLLDLVP
110 120 130 140 150
GHTSEEHEWF KESKKAEPNE FSDRYVWTHS WIQGIAGHPY IGGEADRNGC
160 170 180 190 200
YMLNFFKSQP ALNYGFLNRT EDWQLPPDHP ACIATREALK DVMRFWLDHG
210 220 230 240 250
CDGFRVDMAD SLVKEDDENK SATGKIWQNI RKMLDKDYPE AAIISEWSNP
260 270 280 290 300
VQSLKNGFHA DFYLDHHGNG YNTLIRDNET PGGDHSFLKK DGNGDIMRFL
310 320 330 340 350
LDYLPKYDAT KTDGYISFIT CNHDTPRARL TLDYDELKLA WALFLTLPGV
360 370 380 390 400
PFIYYGDEIG MRYLDIPTKE GGYTRTGSRT PMQWDNSKNK GFSEADQDKL
410 420 430 440 450
YLPVDPSEDA PTVEDQAKDP DSLYNTVKAL TALRHEYDDL KADSTFSVIY
460 470 480 490 500
AEKEEFPFVY RRGNLLIAIN PSEKRDSTAL PAEAFVKTND NSGKQCDLKQ
510 520
IYAIGNSKVD GNTLVTDAQS FAIYKLVD
Length:528
Mass (Da):60,283
Last modified:November 2, 2010 - v1
Checksum:iB19AA90AA8252428
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001810 Genomic DNA. Translation: ADL33472.1.
RefSeqiWP_013280128.1. NC_014387.1.

Genome annotation databases

EnsemblBacteriaiADL33472; ADL33472; bpr_I0729.
KEGGibpb:bpr_I0729.
PATRICi42220701. VBIButPro41874_0729.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001810 Genomic DNA. Translation: ADL33472.1.
RefSeqiWP_013280128.1. NC_014387.1.

3D structure databases

ProteinModelPortaliE0S0Z7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi515622.bpr_I0729.

Proteomic databases

PRIDEiE0S0Z7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADL33472; ADL33472; bpr_I0729.
KEGGibpb:bpr_I0729.
PATRICi42220701. VBIButPro41874_0729.

Phylogenomic databases

HOGENOMiHOG000220640.
KOiK05343.
OMAiHTSEEHE.

Enzyme and pathway databases

BioCyciBPRO515622:GHKV-750-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The Glycobiome of the Rumen Bacterium Butyrivibrio proteoclasticus B316 Highlights Adaptation to a Polysaccharide-Rich Environment."
    Kelly W.J., Leahy S.C., Altermann E., Yeoman C.J., Dunne J.C., Kong Z., Pacheco D.M., Li D., Noel S.J., Moon C.D., Cookson A.L., Attwood G.T.
    PLoS ONE 5:E11942-E11942(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51982 / DSM 14932 / B316Imported.

Entry informationi

Entry nameiE0S0Z7_BUTPB
AccessioniPrimary (citable) accession number: E0S0Z7
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: July 22, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.