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E0RQQ5 (E0RQQ5_SPITD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
D-alanine-D-alanine ligase related protein EMBL ADN01559.1
Gene names
Ordered Locus Names:STHERM_c06000 EMBL ADN01559.1
OrganismSpirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) [Complete proteome] [HAMAP] EMBL ADN01559.1
Taxonomic identifier665571 [NCBI]
Taxonomic lineageBacteria › Spirochaetes › Spirochaetales › Spirochaetaceae › Spirochaeta ›

Protein attributes

Sequence length646 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Cell wall formation By similarity. SAAS SAAS005905

Catalytic activity

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine. SAAS SAAS005905

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity. SAAS SAAS005905

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. SAAS SAAS005905

Subcellular location

Cytoplasm By similarity SAAS SAAS005905.

Sequence similarities

Contains 1 ATP-grasp domain. SAAS SAAS005905

Sequences

Sequence LengthMass (Da)Tools
E0RQQ5 [UniParc].

Last modified November 2, 2010. Version 1.
Checksum: AD1D2FC207D98DDE

FASTA64673,893
        10         20         30         40         50         60 
MEEKVRDTDK PPERRRRRIP AARARCLGPL SDLESHVAPD WWSRIFNSYY MKTDGDVVDD 

        70         80         90        100        110        120 
LAITRREVDL FTSVLDLRED EAVLDLCCGQ GRHSLELARR GFTKVEGLDR SHYLIQRAKA 

       130        140        150        160        170        180 
QAAKEGIPVR FREGDARKLP HPPDQFDVVM ILGNSFGYFE TSKDDLLVLK EVARVLKPWG 

       190        200        210        220        230        240 
RVLLDLADGD FLRAHYVPRS WEWIDPKHFV CRERALSADR QRLISREVIV HTEKGVEVDQ 

       250        260        270        280        290        300 
FYAERLYTPE LIRSLLEEAG FQEVSFHGTL TPDSARGQDL GMMERRILVS ARIRKEWTPV 

       310        320        330        340        350        360 
KPKKKNVSTQ VAVVMGDPSK PDPLKPFMVF DDDDFYTIDR LKAALKECTG YSFTYLSRHE 

       370        380        390        400        410        420 
TLIQDLMRLK GKIDYVFNLC DEGFFNDPRK ELHVPALLEM LGIPYTGATP QGLAFCYDKS 

       430        440        450        460        470        480 
LVRGVAKEMG VPVPRAFFID PTSIVFEVPF GFPMIVKPNL GDSSFGITQK SVVWSLDELS 

       490        500        510        520        530        540 
ACISEIRDTF GYEKPVLVEE FLTGKDLTVG IIGNPPDDYM VLPIVEEDYS ALPPELPRIC 

       550        560        570        580        590        600 
GYEAKWLPDS PYWKALQSIP AGLPEATEKS IVEWCVRLFE RLECRDYARF DWRCDADGNP 

       610        620        630        640 
YLLEVNPNPG WCWDGHLAKM ARLAGMEYPQ MLQAILKAAE RRLGIR

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Spirochaeta thermophila DSM6192."
Angelov A., Mientus M., Wittenberg S., Lehmann R., Liesegang H., Daniel R., Liebl W.
Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 6192.
[2]"Genome sequence of the polysaccharide-degrading, thermophilic anaerobe Spirochaeta thermophila DSM 6192."
Angelov A., Liebl S., Ballschmiter M., Bomeke M., Lehmann R., Liesegang H., Daniel R., Liebl W.
J. Bacteriol. 192:6492-6493(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49972 / DSM 6192 / RI 19.B1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001698 Genomic DNA. Translation: ADN01559.1.
RefSeqYP_003873832.1. NC_014484.1.

3D structure databases

ProteinModelPortalE0RQQ5.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADN01559; ADN01559; STHERM_c06000.
GeneID9755854.
KEGGsta:STHERM_c06000.
PATRIC42520415. VBISpiThe146732_0594.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000244781.
KOK01921.
OMAKELHVPA.

Enzyme and pathway databases

UniPathwayUPA00219.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR025714. Methyltranfer_dom.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
PF13847. Methyltransf_31. 1 hit.
[Graphical view]
SUPFAMSSF52440. PreATP-grasp-like. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE0RQQ5_SPITD
AccessionPrimary (citable) accession number: E0RQQ5
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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