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Protein
Submitted name:

Predicted eukaryotic-type DNA primase

Gene

PPE_01161

Organism
Paenibacillus polymyxa (strain E681)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciPPOL349520:GH6J-1156-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted eukaryotic-type DNA primaseImported
Gene namesi
Ordered Locus Names:PPE_01161Imported
OrganismiPaenibacillus polymyxa (strain E681)Imported
Taxonomic identifieri349520 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000002227 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi349520.PPE_01161.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000244654.
KOiK01971.
OMAiKPLWPEA.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

E0RM81-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQAVKGTIT IEGQEIPITN PDKPLWPEAG VTKALYLRKL AVLAPFLLKY
60 70 80 90 100
CHHRLLTVIR WPHGIHGDFF YQKNAPRPRP DYIETALHDG IEYIVLGKLP
110 120 130 140 150
QLLWLGNQAA LEFHPSLHEA GSKLPCEWMI DLDPSREVEP RIMEAASIVG
160 170 180 190 200
EVLASLGLDS VPKTSGATGV QIIVPIRTGI TFDELRSIGL LVGQFVTEKH
210 220 230 240 250
PHLFTLERLK KDRGTAIYFD YLQHYQGKTL AAPYTPRARP GATVSTPLTW
260 270 280 290 300
EEVRQDVSPL DYHLLNIEER LNQVGDLIDK VPPQPVEDVL KHMRTKAHRT
Length:300
Mass (Da):33,768
Last modified:November 2, 2010 - v1
Checksum:i044EA01316BE8066
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000154 Genomic DNA. Translation: ADM69009.1.
RefSeqiWP_013309189.1. NC_014483.1.

Genome annotation databases

EnsemblBacteriaiADM69009; ADM69009; PPE_01161.
KEGGippy:PPE_01161.
PATRICi42407994. VBIPaePol94484_1147.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000154 Genomic DNA. Translation: ADM69009.1.
RefSeqiWP_013309189.1. NC_014483.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi349520.PPE_01161.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADM69009; ADM69009; PPE_01161.
KEGGippy:PPE_01161.
PATRICi42407994. VBIPaePol94484_1147.

Phylogenomic databases

HOGENOMiHOG000244654.
KOiK01971.
OMAiKPLWPEA.

Enzyme and pathway databases

BioCyciPPOL349520:GH6J-1156-MONOMER.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the polymyxin-producing plant-probiotic rhizobacterium Paenibacillus polymyxa E681."
    Kim J.F., Jeong H., Park S.Y., Kim S.B., Park Y.K., Choi S.K., Ryu C.M., Hur C.G., Ghim S.Y., Oh T.K., Kim J.J., Park C.S., Park S.H.
    J. Bacteriol. 192:6103-6104(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: E681Imported.

Entry informationi

Entry nameiE0RM81_PAEP6
AccessioniPrimary (citable) accession number: E0RM81
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: July 22, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.