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E0RDB7 (E0RDB7_PAEP6) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Thymidine kinase RuleBase RU000544

EC=2.7.1.21 RuleBase RU000544
Gene names
Ordered Locus Names:PPE_02825 EMBL ADM70652.1
OrganismPaenibacillus polymyxa (strain E681) [Complete proteome] [HAMAP] EMBL ADM70652.1
Taxonomic identifier349520 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length198 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. RuleBase RU000544

Sequence similarities

Belongs to the thymidine kinase family.

Ontologies

Keywords
   Biological processDNA synthesis RuleBase RU000544
   LigandATP-binding RuleBase RU000544
Nucleotide-binding
   Molecular functionKinase RuleBase RU000544 EMBL ADM70652.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA replication

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

thymidine kinase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E0RDB7 [UniParc].

Last modified November 2, 2010. Version 1.
Checksum: 617FF16DC8E8FE6A

FASTA19822,257
        10         20         30         40         50         60 
MPTGRITIIT GPMFSEKSGE LIRRCQKLIQ YGHRKVVAYK PAEDNRYAED EIVSRIGYRL 

        70         80         90        100        110        120 
PAISIPRKLT DELVQRILQE TKDADVVAFD EVQFFSRHIM SLVQELAYYG KHVIADGLNL 

       130        140        150        160        170        180 
DYRGKEFGYV GGLLAMADDI EKLTSFCAVC GSSEAVFTQR MVNGKPSTVG PIVMIGDSEA 

       190 
YEPRCRNCFI PPHKVNCD 

« Hide

References

[1]"Genome sequence of the polymyxin-producing plant-probiotic rhizobacterium Paenibacillus polymyxa E681."
Kim J.F., Jeong H., Park S.Y., Kim S.B., Park Y.K., Choi S.K., Ryu C.M., Hur C.G., Ghim S.Y., Oh T.K., Kim J.J., Park C.S., Park S.H.
J. Bacteriol. 192:6103-6104(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: E681 EMBL ADM70652.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000154 Genomic DNA. Translation: ADM70652.1.
RefSeqYP_003871190.1. NC_014483.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADM70652; ADM70652; PPE_02825.
GeneID9775575.
KEGGppy:PPE_02825.
PATRIC42411410. VBIPaePol94484_2840.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000076390.
KOK00857.
OMAKVHAICV.

Enzyme and pathway databases

BioCycPPOL349520:GH6J-2816-MONOMER.

Family and domain databases

InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE0RDB7_PAEP6
AccessionPrimary (citable) accession number: E0RDB7
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: April 16, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)