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E0J309 (E0J309_ECOLW) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Glycoside hydrolase family 1 EMBL EFN37403.1
Gene names
Name:bglB EMBL ADT77354.1
Ordered Locus Names:ECW_m4020 EMBL ADT77354.1, WFL_19650 EMBL AFH13573.1
ORF Names:EschWDRAFT_2966 EMBL EFN37403.1
OrganismEscherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W) [Complete proteome] [HAMAP] EMBL EFN37403.1
Taxonomic identifier566546 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
   Molecular functionGlycosidase RuleBase RU004468
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E0J309 [UniParc].

Last modified November 2, 2010. Version 1.
Checksum: 5D5B8D4BEF8D1BEF

FASTA46452,585
        10         20         30         40         50         60 
MKAFPETFLW GGATAANQVE GAWQEDGKGI STSDLQPHGV MGKMEPRILG KENIKDVAID 

        70         80         90        100        110        120 
FYHRYPEDIA LFAEMGFTCL RISIAWARIF PQGDEVEPNE AGLAFYDRLF DEMAQAGIKP 

       130        140        150        160        170        180 
LVTLSHYEMP YGLVKNYGGW ANRAVIDHFE HYARTVFTRY QHKVALWLTF NEINMSLHEP 

       190        200        210        220        230        240 
FTGVGLAEES GEAEVYQAIH HQLVASARAV KACHSLLPEA KIGNMLLGGL VYPLTCQPQD 

       250        260        270        280        290        300 
MLQAMEENRR WMFFGDVQAR GQYPGYMQRF FRDHNITIEM TESDAEDLKH TVDFISFSYY 

       310        320        330        340        350        360 
MTGCVSHDES INKNAQGNIL NMIPNPHLKS SEWGWQIDSV GLRVLLNTLW DRYQKPLFIV 

       370        380        390        400        410        420 
ENGLGAKDSV EADGSIQDDY RIAYLNDHLV QVNEAIADGV DIMGYTSWGP IDLVSASHSQ 

       430        440        450        460 
MSKRYGFIYV DRDDNGEGSL TRTRKKSFGW YAEVIKTRGL SLKK 

« Hide

References

« Hide 'large scale' references
[1]"The draft genome of Escherichia coli W."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Land M.L., Hauser L., Chang Y.-J., Jeffries C., Tremaine M., Landick R., Keating D., Woyke T.J.
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: W EMBL EFN37403.1.
[2]"The genome sequence of E. coli W (ATCC 9637): comparative genome analysis and an improved genome-scale reconstruction of E. coli."
Archer C.T., Kim J.F., Jeong H., Park J.H., Vickers C.E., Lee S.Y., Nielsen L.K.
BMC Genomics 12:9-9(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W and W EMBL ADT77354.1.
[3]"Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes."
Turner P.C., Yomano L.P., Jarboe L.R., York S.W., Baggett C.L., Moritz B.E., Zentz E.B., Shanmugam K.T., Ingram L.O.
J. Ind. Microbiol. Biotechnol. 39:629-639(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W and W EMBL AFH13573.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002185 Genomic DNA. Translation: ADT77354.1.
CP002967 Genomic DNA. Translation: AFH13573.1.
AEDF01000016 Genomic DNA. Translation: EFN37403.1.
RefSeqYP_006126596.1. NC_017635.1.
YP_006175359.1. NC_017664.1.

3D structure databases

ProteinModelPortalE0J309.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADT77354; ADT77354; ECW_m4020.
AFH13573; AFH13573; WFL_19650.
EFN37403; EFN37403; EschWDRAFT_2966.
GeneID12697772.
12751302.
KEGGell:WFL_19650.
elw:ECW_m4020.
PATRIC41595125. VBIEscCol201000_3273.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01223.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE0J309_ECOLW
AccessionPrimary (citable) accession number: E0J309
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: February 19, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)