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E0IX58 (E0IX58_ECOLW) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=3.2.1.86 EMBL AFH11290.1

Glycoside hydrolase family 1 EMBL EFN39602.1
Gene names
Name:bcgA EMBL ADT75135.1
Ordered Locus Names:ECW_m1662 EMBL ADT75135.1, WFL_08140 EMBL AFH11290.1
ORF Names:EschWDRAFT_1053 EMBL EFN39602.1
OrganismEscherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W) [Complete proteome] [HAMAP] EMBL EFN39602.1
Taxonomic identifier566546 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length479 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
   Molecular functionGlycosidase RuleBase RU004468 EMBL AFH11290.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_function6-phospho-beta-glucosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E0IX58 [UniParc].

Last modified November 2, 2010. Version 1.
Checksum: FA4F959F94C33DF5

FASTA47955,187
        10         20         30         40         50         60 
MSGFKKGFLW GGAVAAHQLE GGWNEGGKGI SIADVMTAGA HGVPREVTEG VIDGLNYPNH 

        70         80         90        100        110        120 
EAIDFYHRYK TDIQLFAEMG FKCFRTSIAW TRIFPQGDEQ EPNEEGLQFY DDLFDECLKQ 

       130        140        150        160        170        180 
GMEPVVTLSH FEMPYHLVTK YGGWRNRKLI DFFIRFASTV FTRYKEKVKY WMTFNEINNQ 

       190        200        210        220        230        240 
VNFSESLCPF TNSGILYSPE EDINEREQIM YQAVHYELVA SALAVQTGKS INPEFNIGCM 

       250        260        270        280        290        300 
IAMCPIYPLT CAPNDMMMAT KAMHRRYWFT DVHARGYYPQ HMLNYFARKG FNLDITPEDN 

       310        320        330        340        350        360 
AILASGCVDF IGFSYYMSFT TQFSPDNPQL DYVEPRDLVS NPYIDTSEWG WQIDPAGLRY 

       370        380        390        400        410        420 
SLNWFWDHFQ LPLFIVENGF GAVDQRQADG TVNDHYRIDY FASHIREMKK AVVEDGVDLI 

       430        440        450        460        470 
GYTPWGCIDL VSAGTGEMKK RYGMIYVDKD NEGKGTLERI RKASFYWYRD LIANNGENI 

« Hide

References

« Hide 'large scale' references
[1]"The draft genome of Escherichia coli W."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Land M.L., Hauser L., Chang Y.-J., Jeffries C., Tremaine M., Landick R., Keating D., Woyke T.J.
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: W EMBL EFN39602.1.
[2]"The genome sequence of E. coli W (ATCC 9637): comparative genome analysis and an improved genome-scale reconstruction of E. coli."
Archer C.T., Kim J.F., Jeong H., Park J.H., Vickers C.E., Lee S.Y., Nielsen L.K.
BMC Genomics 12:9-9(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W and W EMBL ADT75135.1.
[3]"Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes."
Turner P.C., Yomano L.P., Jarboe L.R., York S.W., Baggett C.L., Moritz B.E., Zentz E.B., Shanmugam K.T., Ingram L.O.
J. Ind. Microbiol. Biotechnol. 39:629-639(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W and W EMBL AFH11290.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002185 Genomic DNA. Translation: ADT75135.1.
CP002967 Genomic DNA. Translation: AFH11290.1.
AEDF01000003 Genomic DNA. Translation: EFN39602.1.
RefSeqYP_006124377.1. NC_017635.1.
YP_006173076.1. NC_017664.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADT75135; ADT75135; ECW_m1662.
AFH11290; AFH11290; WFL_08140.
EFN39602; EFN39602; EschWDRAFT_1053.
GeneID12695421.
12753694.
KEGGell:WFL_08140.
elw:ECW_m1662.
PATRIC41590878. VBIEscCol201000_1161.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01223.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE0IX58_ECOLW
AccessionPrimary (citable) accession number: E0IX58
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: April 16, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)