E0IUV6 (E0IUV6_ECOLW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL EFN40153.1

Submitted name:
4-aminobutyrate transaminase EMBL AFH11028.1
EC=2.6.1.19 EMBL AFH11028.1
Submitted name:
GabA aminotransferase, PLP-dependent EMBL ADT74884.1

Gene names

Name:	puuE EMBL ADT74884.1
Ordered Locus Names:	ECW_m1398 EMBL ADT74884.1, WFL_06815 EMBL AFH11028.1
ORF Names:	EschWDRAFT_0182 EMBL EFN40153.1

Organism

Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W) [Complete proteome] [HAMAP] EMBL EFN40153.1

Taxonomic identifier

566546 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	421 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL EFN40153.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E0IUV6 [UniParc]. Last modified November 2, 2010. Version 1. Checksum: 28E5663AC79D8E20	FASTA	421	44,729
	10 20 30 40 50 60 MSNNEFHQRR LSATPRGVGV MCNFFAQSAE NATLKDVEGN EYIDFAAGIA VLNTGHRHPD 70 80 90 100 110 120 LVAAVEQQLQ QFTHTAYQIV PYESYVTLAE KINALAPVSG QAKTAFFTTG AEAVENAVKI 130 140 150 160 170 180 ARAHTGRPGV IAFSGGFHGR TYMTMALTGK VAPYKIGFGP FPGSVYHVPY PSDLHGISTQ 190 200 210 220 230 240 DSLDAIERLF KSDIEAKQVA AIIFEPVQGE GGFNVAPKEL VAAIRRLCDE HGIVMIADEV 250 260 270 280 290 300 QSGFARTGKL FAMDHYVDKP DLMTMAKSLA GGMPLSGVVG NANIMDAPAP GGLGGTYAGN 310 320 330 340 350 360 PLAVAAAHAV LNIIDKESLC ERANQLGQRL KNTLIDAKES VPAIAAVRGL GSMIAAEFND 370 380 390 400 410 420 PQTGEPSAAI AQKIQQRALA QGLLLLTCGA YGNVIRFLYP LTIPDAQFDA AMKILQDALS D

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The draft genome of Escherichia coli W." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Land M.L., Hauser L., Chang Y.-J., Jeffries C., Tremaine M., Landick R., Keating D., Woyke T.J. Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: W EMBL EFN40153.1.
[2]	"The genome sequence of E. coli W (ATCC 9637): comparative genome analysis and an improved genome-scale reconstruction of E. coli." Archer C.T., Kim J.F., Jeong H., Park J.H., Vickers C.E., Lee S.Y., Nielsen L.K. BMC Genomics 12:9-9(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W and W EMBL ADT74884.1.
[3]	"Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes." Turner P.C., Yomano L.P., Jarboe L.R., York S.W., Baggett C.L., Moritz B.E., Zentz E.B., Shanmugam K.T., Ingram L.O. J. Ind. Microbiol. Biotechnol. 39:629-639(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W and W EMBL AFH11028.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002185 Genomic DNA. Translation: ADT74884.1. CP002967 Genomic DNA. Translation: AFH11028.1. AEDF01000001 Genomic DNA. Translation: EFN40153.1.
RefSeq	YP_006124126.1. NC_017635.1. YP_006172814.1. NC_017664.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADT74884; ADT74884; ECW_m1398. AFH11028; AFH11028; WFL_06815. EFN40153; EFN40153; EschWDRAFT_0182.
GeneID	12695157. 12753287.
KEGG	ell:WFL_06815. elw:ECW_m1398.
PATRIC	41588937. VBIEscCol201000_0197.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K00823.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E0IUV6_ECOLW

Accession

Primary (citable) accession number: E0IUV6

Entry history

Integrated into UniProtKB/TrEMBL:	November 2, 2010
Last sequence update:	November 2, 2010
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)