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Protein
Submitted name:

AT-rich interactive domain-containing protein 3C

Gene

Arid3c

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  • chromatin binding Source: MGI

GO - Biological processi

  • positive regulation of transcription from RNA polymerase II promoter Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
AT-rich interactive domain-containing protein 3CImported
Gene namesi
Name:Arid3cImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:3650624. Arid3c.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: MGI
  • membrane raft Source: MGI
  • nucleus Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiE0CY10.
ExpressionAtlasiE0CY10. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000081748.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00550000074575.

Sequencei

Sequence statusi: Fragment.

E0CY10-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEALQRQQAA RLAQGVGPLA PPRLPLPQPP LLGARTLQAP EGAIGVVGAE
60 70 80
EEEGAEDEEG ETPLAEEETA EQSHPGARCP NSPSSQSPG
Length:89
Mass (Da):9,157
Last modified:October 5, 2010 - v1
Checksum:i8C3C5C6AF379F7FD
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei89 – 891Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL807796 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000159930; ENSMUSP00000124563; ENSMUSG00000066224.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL807796 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000081748.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000159930; ENSMUSP00000124563; ENSMUSG00000066224.

Organism-specific databases

MGIiMGI:3650624. Arid3c.

Phylogenomic databases

GeneTreeiENSGT00550000074575.

Miscellaneous databases

NextBioi35553150.
SOURCEiSearch...

Gene expression databases

BgeeiE0CY10.
ExpressionAtlasiE0CY10. baseline and differential.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiE0CY10_MOUSE
AccessioniPrimary (citable) accession number: E0CY10
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: June 24, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.