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Protein
Submitted name:

Trichomaglin

Gene
N/A
Organism
Trichosanthes lepiniana (Snake gourd)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
TrichomaglinImported (EC:3.1.-.-Imported)
OrganismiTrichosanthes lepiniana (Snake gourd)Imported
Taxonomic identifieri282652 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsCucurbitalesCucurbitaceaeSicyoeaeTrichosanthes

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi19 ↔ 31Combined sources
Disulfide bondi25 ↔ 32Combined sources
Disulfide bondi26 ↔ 84Combined sources
Disulfide bondi57 ↔ 90Combined sources
Disulfide bondi58 ↔ 108Combined sources
Disulfide bondi170 ↔ 198Combined sources
Disulfide bondi182 ↔ 192Combined sources

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1SGLX-ray2.20A1-209[»]
SMRiE0CX00.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiE0CX00.

Family & Domainsi

Sequence similaritiesi

Belongs to the RNase T2 family.UniRule annotation

Family and domain databases

CDDicd01061. RNase_T2_euk. 1 hit.
Gene3Di3.90.730.10. 1 hit.
InterProiIPR033697. Ribonuclease_T2_eukaryotic.
IPR001568. RNase_T2-like.
[Graphical view]
PANTHERiPTHR11240. PTHR11240. 1 hit.
PfamiPF00445. Ribonuclease_T2. 1 hit.
[Graphical view]
SUPFAMiSSF55895. SSF55895. 1 hit.

Sequencei

Sequence statusi: Complete.

E0CX00-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
DEREFDYFIL ALQWAGTSCR SGGACCPYNG CCKADSPTQF TIHGLRPEYS
60 70 80 90 100
GGERPSCCTG GSFDPDEIMP FFGKLVEYWP TYRCALEQSC NNRKEILWGQ
110 120 130 140 150
QYEKHGTCAS PVIKGEWNYF KKTLKLFMKY NVDKALEDAG IVASNSKMYD
160 170 180 190 200
LKDIVVAVES AVGARPKLRC DEEGLVQKLS LCFDKDFKPR DCVQVGSCPR

YVSLPEIPD
Length:209
Mass (Da):23,525
Last modified:October 5, 2010 - v1
Checksum:i702BF31B0761CE6A
GO

Cross-referencesi

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1SGLX-ray2.20A1-209[»]
SMRiE0CX00.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiE0CX00.

Family and domain databases

CDDicd01061. RNase_T2_euk. 1 hit.
Gene3Di3.90.730.10. 1 hit.
InterProiIPR033697. Ribonuclease_T2_eukaryotic.
IPR001568. RNase_T2-like.
[Graphical view]
PANTHERiPTHR11240. PTHR11240. 1 hit.
PfamiPF00445. Ribonuclease_T2. 1 hit.
[Graphical view]
SUPFAMiSSF55895. SSF55895. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiE0CX00_TRILE
AccessioniPrimary (citable) accession number: E0CX00
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 2, 2016
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sourcesImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.