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D9TD68 (D9TD68_MICAI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length344 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADL44706.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D9TD68 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 15D4B01907AF8AD9

FASTA34438,668
        10         20         30         40         50         60 
MADRLEEYRR KRDAARTPEP VPERAPGRKR SARRAPRFVI QQHHARSLHW DLRLEHDGVL 

        70         80         90        100        110        120 
ASWAVPRGLP RDPGRNHLAV HTEDHPMEYL TFHGEIPAGE YGGGRMIVHD TGTYRAEKWR 

       130        140        150        160        170        180 
DDEVIVVLDG ERTKGRYVLF ATGGRGRDWM IRRTDPAPEG WTPMPELVRP MLPAEGGRLP 

       190        200        210        220        230        240 
RDAAAWGYEL RWAGVRAMAY VSGGRLRLLD GDDTEVTGDY PWTRAMAEAL APAEAVIDGV 

       250        260        270        280        290        300 
LVRIDPAGRV RPPTRRDGQF LAVDLLWLEG VSSLDVPYAQ RRDLLDGLAL TGPHWQTPPW 

       310        320        330        340 
FPGVGADALR AAREQGLPGV VAKRLDSPYE PGRRSRHWLS IDAS 

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References

[1]"Complete sequence of Micromonospora aurantiaca ATCC 27029."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002162 Genomic DNA. Translation: ADL44706.1.
RefSeqYP_003834282.1. NC_014391.1.

3D structure databases

ProteinModelPortalD9TD68.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL44706; ADL44706; Micau_1144.
GeneID9599214.
KEGGmau:Micau_1144.
PATRIC42387989. VBIMicAur74833_1163.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMALAKHTED.

Enzyme and pathway databases

BioCycMAUR644283:GHOD-1159-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD9TD68_MICAI
AccessionPrimary (citable) accession number: D9TD68
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: April 16, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)