D9TD68 (D9TD68_MICAI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase D, 3'-phosphoesterase domain protein EMBL ADL44706.1

Gene names

Ordered Locus Names:

Micau_1144

Organism

Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) [Complete proteome] [HAMAP] EMBL ADL44706.1

Taxonomic identifier

644283 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Micromonospora › Micromonospora aurantiaca

Protein attributes

Sequence length	344 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADL44706.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D9TD68 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 15D4B01907AF8AD9	FASTA	344	38,668
	10 20 30 40 50 60 MADRLEEYRR KRDAARTPEP VPERAPGRKR SARRAPRFVI QQHHARSLHW DLRLEHDGVL 70 80 90 100 110 120 ASWAVPRGLP RDPGRNHLAV HTEDHPMEYL TFHGEIPAGE YGGGRMIVHD TGTYRAEKWR 130 140 150 160 170 180 DDEVIVVLDG ERTKGRYVLF ATGGRGRDWM IRRTDPAPEG WTPMPELVRP MLPAEGGRLP 190 200 210 220 230 240 RDAAAWGYEL RWAGVRAMAY VSGGRLRLLD GDDTEVTGDY PWTRAMAEAL APAEAVIDGV 250 260 270 280 290 300 LVRIDPAGRV RPPTRRDGQF LAVDLLWLEG VSSLDVPYAQ RRDLLDGLAL TGPHWQTPPW 310 320 330 340 FPGVGADALR AAREQGLPGV VAKRLDSPYE PGRRSRHWLS IDAS

References

[1]

"Complete sequence of Micromonospora aurantiaca ATCC 27029." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T. Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002162 Genomic DNA. Translation: ADL44706.1.
RefSeq	YP_003834282.1. NC_014391.1.
3D structure databases
ProteinModelPortal	D9TD68.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADL44706; ADL44706; Micau_1144.
GeneID	9599214.
KEGG	mau:Micau_1144.
PATRIC	42387989. VBIMicAur74833_1163.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000222509.
KO	K01971.
OMA	VRAMAYV.
Enzyme and pathway databases
BioCyc	MAUR644283:GHOD-1159-MONOMER.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR014144. LigD_PE_domain. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. PF13298. LigD_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D9TD68_MICAI

Accession

Primary (citable) accession number: D9TD68

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)