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D9TD68

- D9TD68_MICAI

UniProt

D9TD68 - D9TD68_MICAI

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Protein
Submitted name:

DNA ligase D, 3'-phosphoesterase domain protein

Gene

Micau_1144

Organism
Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMAUR644283:GHOD-1159-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase D, 3'-phosphoesterase domain proteinImported
Gene namesi
Ordered Locus Names:Micau_1144Imported
OrganismiMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)Imported
Taxonomic identifieri644283 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeMicromonospora
ProteomesiUP000001908: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD9TD68.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiLAKHTED.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D9TD68-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MADRLEEYRR KRDAARTPEP VPERAPGRKR SARRAPRFVI QQHHARSLHW
60 70 80 90 100
DLRLEHDGVL ASWAVPRGLP RDPGRNHLAV HTEDHPMEYL TFHGEIPAGE
110 120 130 140 150
YGGGRMIVHD TGTYRAEKWR DDEVIVVLDG ERTKGRYVLF ATGGRGRDWM
160 170 180 190 200
IRRTDPAPEG WTPMPELVRP MLPAEGGRLP RDAAAWGYEL RWAGVRAMAY
210 220 230 240 250
VSGGRLRLLD GDDTEVTGDY PWTRAMAEAL APAEAVIDGV LVRIDPAGRV
260 270 280 290 300
RPPTRRDGQF LAVDLLWLEG VSSLDVPYAQ RRDLLDGLAL TGPHWQTPPW
310 320 330 340
FPGVGADALR AAREQGLPGV VAKRLDSPYE PGRRSRHWLS IDAS
Length:344
Mass (Da):38,668
Last modified:October 5, 2010 - v1
Checksum:i15D4B01907AF8AD9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002162 Genomic DNA. Translation: ADL44706.1.
RefSeqiWP_013284345.1. NC_014391.1.
YP_003834282.1. NC_014391.1.

Genome annotation databases

EnsemblBacteriaiADL44706; ADL44706; Micau_1144.
GeneIDi9599214.
KEGGimau:Micau_1144.
PATRICi42387989. VBIMicAur74833_1163.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002162 Genomic DNA. Translation: ADL44706.1 .
RefSeqi WP_013284345.1. NC_014391.1.
YP_003834282.1. NC_014391.1.

3D structure databases

ProteinModelPortali D9TD68.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADL44706 ; ADL44706 ; Micau_1144 .
GeneIDi 9599214.
KEGGi mau:Micau_1144.
PATRICi 42387989. VBIMicAur74833_1163.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi LAKHTED.

Enzyme and pathway databases

BioCyci MAUR644283:GHOD-1159-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Micromonospora aurantiaca ATCC 27029."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
    Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442Imported.

Entry informationi

Entry nameiD9TD68_MICAI
AccessioniPrimary (citable) accession number: D9TD68
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 1, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3