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D9TD68

- D9TD68_MICAI

UniProt

D9TD68 - D9TD68_MICAI

Protein
Submitted name:

DNA ligase D, 3'-phosphoesterase domain protein

Gene

Micau_1144

Organism
Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMAUR644283:GHOD-1159-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase D, 3'-phosphoesterase domain proteinImported
    Gene namesi
    Ordered Locus Names:Micau_1144Imported
    OrganismiMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)Imported
    Taxonomic identifieri644283 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeMicromonospora
    ProteomesiUP000001908: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD9TD68.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiLAKHTED.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR014144. LigD_PE_domain.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D9TD68-1 [UniParc]FASTAAdd to Basket

    « Hide

    MADRLEEYRR KRDAARTPEP VPERAPGRKR SARRAPRFVI QQHHARSLHW    50
    DLRLEHDGVL ASWAVPRGLP RDPGRNHLAV HTEDHPMEYL TFHGEIPAGE 100
    YGGGRMIVHD TGTYRAEKWR DDEVIVVLDG ERTKGRYVLF ATGGRGRDWM 150
    IRRTDPAPEG WTPMPELVRP MLPAEGGRLP RDAAAWGYEL RWAGVRAMAY 200
    VSGGRLRLLD GDDTEVTGDY PWTRAMAEAL APAEAVIDGV LVRIDPAGRV 250
    RPPTRRDGQF LAVDLLWLEG VSSLDVPYAQ RRDLLDGLAL TGPHWQTPPW 300
    FPGVGADALR AAREQGLPGV VAKRLDSPYE PGRRSRHWLS IDAS 344
    Length:344
    Mass (Da):38,668
    Last modified:October 5, 2010 - v1
    Checksum:i15D4B01907AF8AD9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002162 Genomic DNA. Translation: ADL44706.1.
    RefSeqiWP_013284345.1. NC_014391.1.
    YP_003834282.1. NC_014391.1.

    Genome annotation databases

    EnsemblBacteriaiADL44706; ADL44706; Micau_1144.
    GeneIDi9599214.
    KEGGimau:Micau_1144.
    PATRICi42387989. VBIMicAur74833_1163.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002162 Genomic DNA. Translation: ADL44706.1 .
    RefSeqi WP_013284345.1. NC_014391.1.
    YP_003834282.1. NC_014391.1.

    3D structure databases

    ProteinModelPortali D9TD68.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADL44706 ; ADL44706 ; Micau_1144 .
    GeneIDi 9599214.
    KEGGi mau:Micau_1144.
    PATRICi 42387989. VBIMicAur74833_1163.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi LAKHTED.

    Enzyme and pathway databases

    BioCyci MAUR644283:GHOD-1159-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014144. LigD_PE_domain.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Micromonospora aurantiaca ATCC 27029."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
      Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442Imported.

    Entry informationi

    Entry nameiD9TD68_MICAI
    AccessioniPrimary (citable) accession number: D9TD68
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3