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D9TCQ2

- D9TCQ2_MICAI

UniProt

D9TCQ2 - D9TCQ2_MICAI

Protein
Submitted name:

Alpha amylase catalytic region

Gene

Micau_5182

Organism
Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciMAUR644283:GHOD-5228-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:Micau_5182Imported
    OrganismiMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)Imported
    Taxonomic identifieri644283 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeMicromonospora
    ProteomesiUP000001908: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD9TCQ2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000220639.
    KOiK05343.
    OMAiQWSTEPH.

    Family and domain databases

    Gene3Di3.20.20.80. 3 hits.
    InterProiIPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    D9TCQ2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGDRWYQEAV VYCLDVDTYA DSDGDGVGDF QGLIGRLDYL ARLGVTCLWL    50
    NPIHPSPNED DGYDATDFYN VDPRLGTLGD FAELLHQASN RGIRVIIDLV 100
    VNHTSDQHPW FQSARSSPDS PYRDWYVWAD HEPDDRHQGM VFPGEQHETW 150
    TYDRTAKAWY YRRFYKFQPD LNIENPKVRA EIKKITSFWL QLGVSGFRMD 200
    AVPFIIERTE PGNPNSPKDF DFLTDLRQHV QWRRGDAVLL AEANVEPDEL 250
    PVYFGDGSGS GNRIHMLFDF MLNGRLMLAL AREDPEVIIE ALRDTPKLPT 300
    GGQWATFLRN HDEIDLSRLT ADQRNDVLAK FGPDENMQLY GRGIRRRLAP 350
    MLGNDRRHME LAYSLQFSLR GTPVLRYGEE IGMGENLSLD GRDAIRTPMQ 400
    WSYADNAGFS AAEPEKLVRP VIDKGEYGYQ KVNVTAQRKD PRSLLGWFER 450
    MIRTLREAPE TGSGSTTHID VPMPPGVLAH RADGRTGTMV FLHNLGTEDV 500
    EVDLSTLAPE ADLPIDVLSD RNYEDVGKLD RLKLGGYGYR WIRLCRGHER 550
    Length:550
    Mass (Da):62,797
    Last modified:October 5, 2010 - v1
    Checksum:i480F455BEB49972C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002162 Genomic DNA. Translation: ADL48689.1.
    RefSeqiYP_003838265.1. NC_014391.1.

    Genome annotation databases

    EnsemblBacteriaiADL48689; ADL48689; Micau_5182.
    GeneIDi9603283.
    KEGGimau:Micau_5182.
    PATRICi42396159. VBIMicAur74833_5218.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002162 Genomic DNA. Translation: ADL48689.1 .
    RefSeqi YP_003838265.1. NC_014391.1.

    3D structure databases

    ProteinModelPortali D9TCQ2.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADL48689 ; ADL48689 ; Micau_5182 .
    GeneIDi 9603283.
    KEGGi mau:Micau_5182.
    PATRICi 42396159. VBIMicAur74833_5218.

    Phylogenomic databases

    HOGENOMi HOG000220639.
    KOi K05343.
    OMAi QWSTEPH.

    Enzyme and pathway databases

    BioCyci MAUR644283:GHOD-5228-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 3 hits.
    InterProi IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Micromonospora aurantiaca ATCC 27029."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
      Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442Imported.

    Entry informationi

    Entry nameiD9TCQ2_MICAI
    AccessioniPrimary (citable) accession number: D9TCQ2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3