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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Micau_5182

Organism
Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciMAUR644283:GHOD-5228-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Micau_5182Imported
OrganismiMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)Imported
Taxonomic identifieri644283 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeMicromonospora
ProteomesiUP000001908: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD9TCQ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000220639.
KOiK05343.
OMAiPDRDDGY.

Family and domain databases

Gene3Di3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

D9TCQ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGDRWYQEAV VYCLDVDTYA DSDGDGVGDF QGLIGRLDYL ARLGVTCLWL
60 70 80 90 100
NPIHPSPNED DGYDATDFYN VDPRLGTLGD FAELLHQASN RGIRVIIDLV
110 120 130 140 150
VNHTSDQHPW FQSARSSPDS PYRDWYVWAD HEPDDRHQGM VFPGEQHETW
160 170 180 190 200
TYDRTAKAWY YRRFYKFQPD LNIENPKVRA EIKKITSFWL QLGVSGFRMD
210 220 230 240 250
AVPFIIERTE PGNPNSPKDF DFLTDLRQHV QWRRGDAVLL AEANVEPDEL
260 270 280 290 300
PVYFGDGSGS GNRIHMLFDF MLNGRLMLAL AREDPEVIIE ALRDTPKLPT
310 320 330 340 350
GGQWATFLRN HDEIDLSRLT ADQRNDVLAK FGPDENMQLY GRGIRRRLAP
360 370 380 390 400
MLGNDRRHME LAYSLQFSLR GTPVLRYGEE IGMGENLSLD GRDAIRTPMQ
410 420 430 440 450
WSYADNAGFS AAEPEKLVRP VIDKGEYGYQ KVNVTAQRKD PRSLLGWFER
460 470 480 490 500
MIRTLREAPE TGSGSTTHID VPMPPGVLAH RADGRTGTMV FLHNLGTEDV
510 520 530 540 550
EVDLSTLAPE ADLPIDVLSD RNYEDVGKLD RLKLGGYGYR WIRLCRGHER
Length:550
Mass (Da):62,797
Last modified:October 5, 2010 - v1
Checksum:i480F455BEB49972C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002162 Genomic DNA. Translation: ADL48689.1.
RefSeqiWP_013288302.1. NC_014391.1.
YP_003838265.1. NC_014391.1.

Genome annotation databases

EnsemblBacteriaiADL48689; ADL48689; Micau_5182.
GeneIDi9603283.
KEGGimau:Micau_5182.
PATRICi42396159. VBIMicAur74833_5218.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002162 Genomic DNA. Translation: ADL48689.1.
RefSeqiWP_013288302.1. NC_014391.1.
YP_003838265.1. NC_014391.1.

3D structure databases

ProteinModelPortaliD9TCQ2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADL48689; ADL48689; Micau_5182.
GeneIDi9603283.
KEGGimau:Micau_5182.
PATRICi42396159. VBIMicAur74833_5218.

Phylogenomic databases

HOGENOMiHOG000220639.
KOiK05343.
OMAiPDRDDGY.

Enzyme and pathway databases

BioCyciMAUR644283:GHOD-5228-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Micromonospora aurantiaca ATCC 27029."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
    Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442Imported.

Entry informationi

Entry nameiD9TCQ2_MICAI
AccessioniPrimary (citable) accession number: D9TCQ2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: March 4, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.