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D9TCH8 (D9TCH8_MICAI) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length666 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1531Proton donor By similarity PIRSR PIRSR001084-1
Active site3121Nucleophile By similarity PIRSR PIRSR001084-1
Metal binding1181Zinc By similarity PIRSR PIRSR001084-3
Metal binding1581Zinc By similarity PIRSR PIRSR001084-3
Metal binding1601Zinc By similarity PIRSR PIRSR001084-3
Binding site1141Substrate By similarity PIRSR PIRSR001084-2
Binding site1521Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
D9TCH8 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: D6C588739D9D1214

FASTA66672,216
        10         20         30         40         50         60 
MPTKALWDDG RLCYGGDWNP EQWPPDVWRE DVALMRAAGV NLVTVGVFAW SRLEPEPGRY 

        70         80         90        100        110        120 
TLDWLDDVLD LLHTGGIRAA LATPTASPPP WFSLRHPDAL PLTADGVRLH HGSRDTYCAA 

       130        140        150        160        170        180 
APAYRDAARG IAEVLAARYA HHPALALWHV HNEYGTTCHC PHAETAFRHW LTTRYGDLDA 

       190        200        210        220        230        240 
LNDAWVTSFW SQHYSDWAQV GTPRATQYLA NPGQLLDFRR FWSDTLLSAY TEQRDLLRAA 

       250        260        270        280        290        300 
NPAVPVTTNY VLGDWVPVDH ARWAREVDLV AIDHYPSATD LGAEEQTAFA ADLARGWARH 

       310        320        330        340        350        360 
GAGRPVPWLL MESAPNQIHT AGRMHTKEPG RMIRHSLAHI ARGSAGVMFF QWRAPAGGAE 

       370        380        390        400        410        420 
RFHSAVVSHA GPDTRVFREA ADLGAALGRL AGAAPGRVQA AVAIAYDAAS GWALRHPGMP 

       430        440        450        460        470        480 
RDGLDHPGEA AAVHRALWHA GVTADVVPPG APLDGARLLV LPALYLASDA TVDWVRRHVH 

       490        500        510        520        530        540 
DGGHLLVTWL SGVADEHARV RLGGYPGAYR DLLGVRVEEF HPLADDEHVP LTGGGTGRIW 

       550        560        570        580        590        600 
SETVHPAGAE TVSAYAGGVP AGRPAITRNR VGDAYAWYVS TRPDDDTYRR LLTEAARLAG 

       610        620        630        640        650        660 
VAPACPGAPE GVEAVRRHDG LLYLLNHTDR PQRVPAAGFE LLTGAAVDGE LTVAPGAVAV 


VREKTP

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References

[1]"Complete sequence of Micromonospora aurantiaca ATCC 27029."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002162 Genomic DNA. Translation: ADL46676.1.
RefSeqYP_003836252.1. NC_014391.1.

3D structure databases

ProteinModelPortalD9TCH8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL46676; ADL46676; Micau_3147.
GeneID9601234.
KEGGmau:Micau_3147.
PATRIC42392003. VBIMicAur74833_3153.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000117811.
KOK12308.
OMALTHGSRD.

Enzyme and pathway databases

BioCycMAUR644283:GHOD-3179-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD9TCH8_MICAI
AccessionPrimary (citable) accession number: D9TCH8
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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