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D9TCH8

- D9TCH8_MICAI

UniProt

D9TCH8 - D9TCH8_MICAI

Protein

Beta-galactosidase

Gene

Micau_3147

Organism
Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei114 – 1141SubstrateUniRule annotation
    Metal bindingi118 – 1181ZincUniRule annotation
    Binding sitei152 – 1521SubstrateUniRule annotation
    Active sitei153 – 1531Proton donorUniRule annotation
    Metal bindingi158 – 1581ZincUniRule annotation
    Metal bindingi160 – 1601ZincUniRule annotation
    Active sitei312 – 3121NucleophileUniRule annotation

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC
    2. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. galactose metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Ligandi

    Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciMAUR644283:GHOD-3179-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
    Short name:
    Beta-galUniRule annotation
    Gene namesi
    Ordered Locus Names:Micau_3147Imported
    OrganismiMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)Imported
    Taxonomic identifieri644283 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeMicromonospora
    ProteomesiUP000001908: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. beta-galactosidase complex Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliD9TCH8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 42 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000117811.
    KOiK12308.
    OMAiLTHGSRD.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProiIPR013739. Beta_galactosidase_C.
    IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF02449. Glyco_hydro_42. 1 hit.
    PF08533. Glyco_hydro_42C. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001084. B-galactosidase. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D9TCH8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPTKALWDDG RLCYGGDWNP EQWPPDVWRE DVALMRAAGV NLVTVGVFAW    50
    SRLEPEPGRY TLDWLDDVLD LLHTGGIRAA LATPTASPPP WFSLRHPDAL 100
    PLTADGVRLH HGSRDTYCAA APAYRDAARG IAEVLAARYA HHPALALWHV 150
    HNEYGTTCHC PHAETAFRHW LTTRYGDLDA LNDAWVTSFW SQHYSDWAQV 200
    GTPRATQYLA NPGQLLDFRR FWSDTLLSAY TEQRDLLRAA NPAVPVTTNY 250
    VLGDWVPVDH ARWAREVDLV AIDHYPSATD LGAEEQTAFA ADLARGWARH 300
    GAGRPVPWLL MESAPNQIHT AGRMHTKEPG RMIRHSLAHI ARGSAGVMFF 350
    QWRAPAGGAE RFHSAVVSHA GPDTRVFREA ADLGAALGRL AGAAPGRVQA 400
    AVAIAYDAAS GWALRHPGMP RDGLDHPGEA AAVHRALWHA GVTADVVPPG 450
    APLDGARLLV LPALYLASDA TVDWVRRHVH DGGHLLVTWL SGVADEHARV 500
    RLGGYPGAYR DLLGVRVEEF HPLADDEHVP LTGGGTGRIW SETVHPAGAE 550
    TVSAYAGGVP AGRPAITRNR VGDAYAWYVS TRPDDDTYRR LLTEAARLAG 600
    VAPACPGAPE GVEAVRRHDG LLYLLNHTDR PQRVPAAGFE LLTGAAVDGE 650
    LTVAPGAVAV VREKTP 666
    Length:666
    Mass (Da):72,216
    Last modified:October 5, 2010 - v1
    Checksum:iD6C588739D9D1214
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002162 Genomic DNA. Translation: ADL46676.1.
    RefSeqiYP_003836252.1. NC_014391.1.

    Genome annotation databases

    EnsemblBacteriaiADL46676; ADL46676; Micau_3147.
    GeneIDi9601234.
    KEGGimau:Micau_3147.
    PATRICi42392003. VBIMicAur74833_3153.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002162 Genomic DNA. Translation: ADL46676.1 .
    RefSeqi YP_003836252.1. NC_014391.1.

    3D structure databases

    ProteinModelPortali D9TCH8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADL46676 ; ADL46676 ; Micau_3147 .
    GeneIDi 9601234.
    KEGGi mau:Micau_3147.
    PATRICi 42392003. VBIMicAur74833_3153.

    Phylogenomic databases

    HOGENOMi HOG000117811.
    KOi K12308.
    OMAi LTHGSRD.

    Enzyme and pathway databases

    BioCyci MAUR644283:GHOD-3179-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProi IPR013739. Beta_galactosidase_C.
    IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF02449. Glyco_hydro_42. 1 hit.
    PF08533. Glyco_hydro_42C. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001084. B-galactosidase. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Micromonospora aurantiaca ATCC 27029."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
      Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442Imported.

    Entry informationi

    Entry nameiD9TCH8_MICAI
    AccessioniPrimary (citable) accession number: D9TCH8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3