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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Micau_0485

Organism
Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciMAUR644283:GHOD-494-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Micau_0485Imported
OrganismiMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)Imported
Taxonomic identifieri644283 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicromonosporalesMicromonosporaceaeMicromonospora
ProteomesiUP000001908 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi644283.Micau_0485.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000244654.
KOiK01971.
OMAiCVYSLRA.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

D9T7M0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSERLKVEV EGRSLELSNL DKVLFPKAGF TKGEVIDYYT RIAPVLLPHL
60 70 80 90 100
RDRALTRIRF PNGVDGGSFF EKNAPAATPG WVRTENLPAP GSTKGRETID
110 120 130 140 150
YVVCDELPTL VWLANLAALE LHTPQWKIGA HPDMMVVDLD PGAPAALKQC
160 170 180 190 200
CRVALLMRDR LADDGISSFP KTSGKKGMQL CCPIAGTQDA EVVSDYAKRI
210 220 230 240 250
AQELEQAHPK LVVSKMAKNL RPGKIFIDWS QNNAAKTTVA PYSLRAQSVP
260 270 280 290 300
SVSTPLTWDE VEAGAAGKRP STRPYTAGEV LKRVEKQGDL LAPLLDGGPE

LP
Length:302
Mass (Da):32,888
Last modified:October 5, 2010 - v1
Checksum:i7AA1EB5A60AE30D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002162 Genomic DNA. Translation: ADL44052.1.
RefSeqiWP_013283691.1. NC_014391.1.
YP_003833628.1. NC_014391.1.

Genome annotation databases

EnsemblBacteriaiADL44052; ADL44052; Micau_0485.
KEGGimau:Micau_0485.
PATRICi42386654. VBIMicAur74833_0501.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002162 Genomic DNA. Translation: ADL44052.1.
RefSeqiWP_013283691.1. NC_014391.1.
YP_003833628.1. NC_014391.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi644283.Micau_0485.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADL44052; ADL44052; Micau_0485.
KEGGimau:Micau_0485.
PATRICi42386654. VBIMicAur74833_0501.

Phylogenomic databases

HOGENOMiHOG000244654.
KOiK01971.
OMAiCVYSLRA.

Enzyme and pathway databases

BioCyciMAUR644283:GHOD-494-MONOMER.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Micromonospora aurantiaca ATCC 27029."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
    Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442Imported.

Entry informationi

Entry nameiD9T7M0_MICAI
AccessioniPrimary (citable) accession number: D9T7M0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: June 24, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.