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D9T230 (D9T230_MICAI) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycoside hydrolase family 59 EMBL ADL45507.1
Gene names
Ordered Locus Names:Micau_1959
OrganismMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) [Complete proteome] [HAMAP] EMBL ADL45507.1
Taxonomic identifier644283 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Micromonospora ›

Protein attributes

Sequence length809 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ADL45507.1
   Molecular functionHydrolase EMBL ADL45507.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

galactosylceramide catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functiongalactosylceramidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4242 Potential EMBL ADL45507.1
Chain43 – 809767 Potential EMBL ADL45507.1
PRO_5000619878

Sequences

Sequence LengthMass (Da)Tools
D9T230 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 4CE1F033151FD8F5

FASTA80984,555
        10         20         30         40         50         60 
MVIPRPRPVR SGPSRLAAPA LALALAATGG GLTLAATPAQ AATSITVNGA SGGQTFDGVG 

        70         80         90        100        110        120 
AVSGGGGNSR LLIDYPEPQR GQILDYLFKP GHGAALQILK VEMGGDTNST SGSEPSHEHV 

       130        140        150        160        170        180 
RGDLNCNRGY QWWIMEQAKA RNPAIKLAAL PWGAPGWIGN GNFMSQDMIN YFVDWLGCAR 

       190        200        210        220        230        240 
QHNLTMDYVT AAQNEKRTDA NWTISLRQAL NSNGYGNVKI IYGDDYPGSW GPANAVAGNT 

       250        260        270        280        290        300 
TLRNSIDVLS GHYPCGYLSA QTTCTVSSTA TSTGKTLWNS EGGSQDYNDG AKPLARGINR 

       310        320        330        340        350        360 
GYIDGRMVAY LNWDLIAAIT PNLPWSTVGL ILANQPWSGW YSVGKNTWAL AHTTQFTAPG 

       370        380        390        400        410        420 
WRYLDSSSGY LGGNRNNGSY VSLRSPTGGD YSTVIETMDA TSAQQLTVNV TGGLSTGQVH 

       430        440        450        460        470        480 
VWSTNLNSTN PNDFFVRGAD ITPSGGSFSL TVQPGHLYTV TTTTGQGKGT ATSPAQGSLG 

       490        500        510        520        530        540 
LPYRDDFDGY AAGRIPKYLQ DMQGAFETVG CGGGRAGMCL RQMSAQAPIT WKTLADPATY 

       550        560        570        580        590        600 
GGNLSWGNYT VSADVLLEQS GYAQIQGRVG TTNLDPIGRY NGYFLRVTDS GSWSILRNNT 

       610        620        630        640        650        660 
AGQLATLRSG NVAALGTNRW HSLALGFAGS TITATIDGTT VGTVTDSTFG TGQVGFGTSQ 

       670        680        690        700        710        720 
GETAQFDNLS VVAGPGGNPG GTSGALLNPN SSRCLDVPNQ SQTNGTQVTL WECNGGANQQ 

       730        740        750        760        770        780 
WTATSGRQLQ VYGGKCLDAE GQGTSSGTRV IIWDCNGGAN QQWNVNTDGT ITGVQSGLCL 

       790        800 
SPNGGGTGNG TPIVLSACTG GSSQKWSRA

« Hide

References

[1]"Complete sequence of Micromonospora aurantiaca ATCC 27029."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002162 Genomic DNA. Translation: ADL45507.1.
RefSeqYP_003835083.1. NC_014391.1.

3D structure databases

ProteinModelPortalD9T230.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL45507; ADL45507; Micau_1959.
GeneID9600042.
KEGGmau:Micau_1959.
PATRIC42389617. VBIMicAur74833_1964.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000101539.
OMAAGWIIYA.

Enzyme and pathway databases

BioCycMAUR644283:GHOD-1987-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR001286. Glyco_hydro_59.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR000772. Ricin_B_lectin.
[Graphical view]
PANTHERPTHR15172. PTHR15172. 1 hit.
PfamPF02057. Glyco_hydro_59. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
SMARTSM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
SSF50370. RicinB_like. 1 hit.
PROSITEPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD9T230_MICAI
AccessionPrimary (citable) accession number: D9T230
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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