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Protein
Submitted name:

Polysaccharide deacetylase

Gene

Micau_6007

Organism
Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciMAUR644283:GHOD-6067-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Polysaccharide deacetylaseImported
Gene namesi
Ordered Locus Names:Micau_6007Imported
OrganismiMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)Imported
Taxonomic identifieri644283 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicromonosporalesMicromonosporaceaeMicromonospora
Proteomesi
  • UP000001908 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4040Sequence analysisAdd
BLAST
Chaini41 – 355315Sequence analysisPRO_5003128625Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi644283.Micau_6007.

Structurei

3D structure databases

ProteinModelPortaliD9T1Q0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini51 – 226176NodB homologyInterPro annotationAdd
BLAST
Domaini260 – 35596CBM2 (carbohydrate binding type-2)InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4108ZJ4. Bacteria.
COG0726. LUCA.
HOGENOMiHOG000260719.
OMAiAEEGHIL.

Family and domain databases

Gene3Di2.60.40.290. 1 hit.
3.20.20.370. 1 hit.
InterProiIPR008965. Carb-bd_dom.
IPR001919. CBD2.
IPR012291. CBD_carb-bd_dom.
IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR002509. NODB_dom.
[Graphical view]
PfamiPF01522. Polysacc_deac_1. 1 hit.
[Graphical view]
SMARTiSM00637. CBD_II. 1 hit.
[Graphical view]
SUPFAMiSSF49384. SSF49384. 1 hit.
SSF88713. SSF88713. 1 hit.
PROSITEiPS51173. CBM2. 1 hit.
PS51677. NODB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D9T1Q0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYASIGGSRR PSTPRTSRLT VRLAVLASTV ALSAAGLAVA ATPSSAAVCN
60 70 80 90 100
GYVGLTFDDG PTGSTSALLS VLRANGVRAT MFNVGQNVQS NPSAARAQVD
110 120 130 140 150
AGMWVANHSW NHAHMTSMSQ SQMQSDLSQT NSAIQSATGV RPQLFRPPYG
160 170 180 190 200
ETNSTLQSVA SSLGLRQVIW DVDSQDWNGA SVGQIVSNAG RLQAGQVILM
210 220 230 240 250
HDGIQNTRDA IPQIMANLSS RNLCPGMISP STGRAVAPDG TPPPTTPPPT
260 270 280 290 300
GTPTTPPPTT PPPSGGCTAT ATTPNVWGDR YNTSVTVQGA GNWTVVVALT
310 320 330 340 350
PPQRVSTTWN GSPSWDSTGY VMTMRSNGSG NTFGFTTMMN GNSGARPQIR

SCTTG
Length:355
Mass (Da):36,792
Last modified:October 5, 2010 - v1
Checksum:i14ADED727DE547BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002162 Genomic DNA. Translation: ADL49509.1.
RefSeqiWP_013289106.1. NC_014391.1.

Genome annotation databases

EnsemblBacteriaiADL49509; ADL49509; Micau_6007.
KEGGimau:Micau_6007.
PATRICi42397859. VBIMicAur74833_6059.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002162 Genomic DNA. Translation: ADL49509.1.
RefSeqiWP_013289106.1. NC_014391.1.

3D structure databases

ProteinModelPortaliD9T1Q0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi644283.Micau_6007.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADL49509; ADL49509; Micau_6007.
KEGGimau:Micau_6007.
PATRICi42397859. VBIMicAur74833_6059.

Phylogenomic databases

eggNOGiENOG4108ZJ4. Bacteria.
COG0726. LUCA.
HOGENOMiHOG000260719.
OMAiAEEGHIL.

Enzyme and pathway databases

BioCyciMAUR644283:GHOD-6067-MONOMER.

Family and domain databases

Gene3Di2.60.40.290. 1 hit.
3.20.20.370. 1 hit.
InterProiIPR008965. Carb-bd_dom.
IPR001919. CBD2.
IPR012291. CBD_carb-bd_dom.
IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR002509. NODB_dom.
[Graphical view]
PfamiPF01522. Polysacc_deac_1. 1 hit.
[Graphical view]
SMARTiSM00637. CBD_II. 1 hit.
[Graphical view]
SUPFAMiSSF49384. SSF49384. 1 hit.
SSF88713. SSF88713. 1 hit.
PROSITEiPS51173. CBM2. 1 hit.
PS51677. NODB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Micromonospora aurantiaca ATCC 27029."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
    Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442Imported.

Entry informationi

Entry nameiD9T1Q0_MICAI
AccessioniPrimary (citable) accession number: D9T1Q0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: March 16, 2016
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.