D9SZR9 (D9SZR9_MICAI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADL45201.1

Gene names

Ordered Locus Names:

Micau_1646

Organism

Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) [Complete proteome] [HAMAP] EMBL ADL45201.1

Taxonomic identifier

644283 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Micromonospora › Micromonospora aurantiaca

Protein attributes

Sequence length	370 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADL45201.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D9SZR9 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: D3008BC1CA603AC1	FASTA	370	41,643
	10 20 30 40 50 60 MDLPINPPVE PMLAKSVAEL PTDAGLTYEP KWDGFRCIVF RDGDEVELAS RGGKSMTRYF 70 80 90 100 110 120 PEVVEQARRQ LPARCAVDGE LIVIRRDGPG GQPRLDFELL AQRIHPAASR VKLLAETTPA 130 140 150 160 170 180 DFVAFDLLAI DDELLVDQPY PRRRERLEQA LSGVRPPVHV TQVTTDPETA RRWFDVFEGA 190 200 210 220 230 240 GLDGLIVKPA DLPYEPGKRL MFKVKHARTM DAVVAGFRWH KSGPVIGSLL LGLYDDDGVL 250 260 270 280 290 300 HHIGVSSSFT MARRKELLDE LEPYRDVGGE HPWVHGDHER GQRIPGGVSR WTGGKNLEWE 310 320 330 340 350 360 PLRPALVVEV AYDAMEGDRL RHTARFLRWR PDRDPRSCDY GQLDRPIRYD VDEVLRGDPA 370 ATVGDTRGRA

References

[1]

"Complete sequence of Micromonospora aurantiaca ATCC 27029." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T. Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002162 Genomic DNA. Translation: ADL45201.1.
RefSeq	YP_003834777.1. NC_014391.1.
3D structure databases
ProteinModelPortal	D9SZR9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADL45201; ADL45201; Micau_1646.
GeneID	9599723.
KEGG	mau:Micau_1646.
PATRIC	42389011. VBIMicAur74833_1667.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000222508.
KO	K01971.
OMA	FKIKHER.
Enzyme and pathway databases
BioCyc	MAUR644283:GHOD-1668-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D9SZR9_MICAI

Accession

Primary (citable) accession number: D9SZR9

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)