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D9SZR9

- D9SZR9_MICAI

UniProt

D9SZR9 - D9SZR9_MICAI

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
Micau_1646
Organism
Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMAUR644283:GHOD-1668-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Micau_1646Imported
OrganismiMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)Imported
Taxonomic identifieri644283 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeMicromonospora
ProteomesiUP000001908: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD9SZR9.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D9SZR9-1 [UniParc]FASTAAdd to Basket

« Hide

MDLPINPPVE PMLAKSVAEL PTDAGLTYEP KWDGFRCIVF RDGDEVELAS    50
RGGKSMTRYF PEVVEQARRQ LPARCAVDGE LIVIRRDGPG GQPRLDFELL 100
AQRIHPAASR VKLLAETTPA DFVAFDLLAI DDELLVDQPY PRRRERLEQA 150
LSGVRPPVHV TQVTTDPETA RRWFDVFEGA GLDGLIVKPA DLPYEPGKRL 200
MFKVKHARTM DAVVAGFRWH KSGPVIGSLL LGLYDDDGVL HHIGVSSSFT 250
MARRKELLDE LEPYRDVGGE HPWVHGDHER GQRIPGGVSR WTGGKNLEWE 300
PLRPALVVEV AYDAMEGDRL RHTARFLRWR PDRDPRSCDY GQLDRPIRYD 350
VDEVLRGDPA ATVGDTRGRA 370
Length:370
Mass (Da):41,643
Last modified:October 5, 2010 - v1
Checksum:iD3008BC1CA603AC1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002162 Genomic DNA. Translation: ADL45201.1.
RefSeqiYP_003834777.1. NC_014391.1.

Genome annotation databases

EnsemblBacteriaiADL45201; ADL45201; Micau_1646.
GeneIDi9599723.
KEGGimau:Micau_1646.
PATRICi42389011. VBIMicAur74833_1667.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002162 Genomic DNA. Translation: ADL45201.1 .
RefSeqi YP_003834777.1. NC_014391.1.

3D structure databases

ProteinModelPortali D9SZR9.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADL45201 ; ADL45201 ; Micau_1646 .
GeneIDi 9599723.
KEGGi mau:Micau_1646.
PATRICi 42389011. VBIMicAur74833_1667.

Phylogenomic databases

HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.

Enzyme and pathway databases

BioCyci MAUR644283:GHOD-1668-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Micromonospora aurantiaca ATCC 27029."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
    Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442.

Entry informationi

Entry nameiD9SZR9_MICAI
AccessioniPrimary (citable) accession number: D9SZR9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: May 14, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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