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D9SZR9 (D9SZR9_MICAI) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length370 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
D9SZR9 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: D3008BC1CA603AC1

FASTA37041,643
        10         20         30         40         50         60 
MDLPINPPVE PMLAKSVAEL PTDAGLTYEP KWDGFRCIVF RDGDEVELAS RGGKSMTRYF 

        70         80         90        100        110        120 
PEVVEQARRQ LPARCAVDGE LIVIRRDGPG GQPRLDFELL AQRIHPAASR VKLLAETTPA 

       130        140        150        160        170        180 
DFVAFDLLAI DDELLVDQPY PRRRERLEQA LSGVRPPVHV TQVTTDPETA RRWFDVFEGA 

       190        200        210        220        230        240 
GLDGLIVKPA DLPYEPGKRL MFKVKHARTM DAVVAGFRWH KSGPVIGSLL LGLYDDDGVL 

       250        260        270        280        290        300 
HHIGVSSSFT MARRKELLDE LEPYRDVGGE HPWVHGDHER GQRIPGGVSR WTGGKNLEWE 

       310        320        330        340        350        360 
PLRPALVVEV AYDAMEGDRL RHTARFLRWR PDRDPRSCDY GQLDRPIRYD VDEVLRGDPA 

       370 
ATVGDTRGRA 

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References

[1]"Complete sequence of Micromonospora aurantiaca ATCC 27029."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002162 Genomic DNA. Translation: ADL45201.1.
RefSeqYP_003834777.1. NC_014391.1.

3D structure databases

ProteinModelPortalD9SZR9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL45201; ADL45201; Micau_1646.
GeneID9599723.
KEGGmau:Micau_1646.
PATRIC42389011. VBIMicAur74833_1667.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222508.
KOK01971.
OMAERTADCV.

Enzyme and pathway databases

BioCycMAUR644283:GHOD-1668-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD9SZR9_MICAI
AccessionPrimary (citable) accession number: D9SZR9
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 16, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)