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D9SZR9

- D9SZR9_MICAI

UniProt

D9SZR9 - D9SZR9_MICAI

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Micau_1646

Organism
Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMAUR644283:GHOD-1668-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Micau_1646Imported
    OrganismiMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)Imported
    Taxonomic identifieri644283 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeMicromonospora
    ProteomesiUP000001908: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD9SZR9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiHERTADC.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D9SZR9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDLPINPPVE PMLAKSVAEL PTDAGLTYEP KWDGFRCIVF RDGDEVELAS    50
    RGGKSMTRYF PEVVEQARRQ LPARCAVDGE LIVIRRDGPG GQPRLDFELL 100
    AQRIHPAASR VKLLAETTPA DFVAFDLLAI DDELLVDQPY PRRRERLEQA 150
    LSGVRPPVHV TQVTTDPETA RRWFDVFEGA GLDGLIVKPA DLPYEPGKRL 200
    MFKVKHARTM DAVVAGFRWH KSGPVIGSLL LGLYDDDGVL HHIGVSSSFT 250
    MARRKELLDE LEPYRDVGGE HPWVHGDHER GQRIPGGVSR WTGGKNLEWE 300
    PLRPALVVEV AYDAMEGDRL RHTARFLRWR PDRDPRSCDY GQLDRPIRYD 350
    VDEVLRGDPA ATVGDTRGRA 370
    Length:370
    Mass (Da):41,643
    Last modified:October 5, 2010 - v1
    Checksum:iD3008BC1CA603AC1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002162 Genomic DNA. Translation: ADL45201.1.
    RefSeqiYP_003834777.1. NC_014391.1.

    Genome annotation databases

    EnsemblBacteriaiADL45201; ADL45201; Micau_1646.
    GeneIDi9599723.
    KEGGimau:Micau_1646.
    PATRICi42389011. VBIMicAur74833_1667.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002162 Genomic DNA. Translation: ADL45201.1 .
    RefSeqi YP_003834777.1. NC_014391.1.

    3D structure databases

    ProteinModelPortali D9SZR9.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADL45201 ; ADL45201 ; Micau_1646 .
    GeneIDi 9599723.
    KEGGi mau:Micau_1646.
    PATRICi 42389011. VBIMicAur74833_1667.

    Phylogenomic databases

    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi HERTADC.

    Enzyme and pathway databases

    BioCyci MAUR644283:GHOD-1668-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Micromonospora aurantiaca ATCC 27029."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
      Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442Imported.

    Entry informationi

    Entry nameiD9SZR9_MICAI
    AccessioniPrimary (citable) accession number: D9SZR9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3