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D9SZR9

- D9SZR9_MICAI

UniProt

D9SZR9 - D9SZR9_MICAI

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Micau_1646

Organism
Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMAUR644283:GHOD-1668-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Micau_1646Imported
OrganismiMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)Imported
Taxonomic identifieri644283 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeMicromonospora
ProteomesiUP000001908: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD9SZR9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D9SZR9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDLPINPPVE PMLAKSVAEL PTDAGLTYEP KWDGFRCIVF RDGDEVELAS
60 70 80 90 100
RGGKSMTRYF PEVVEQARRQ LPARCAVDGE LIVIRRDGPG GQPRLDFELL
110 120 130 140 150
AQRIHPAASR VKLLAETTPA DFVAFDLLAI DDELLVDQPY PRRRERLEQA
160 170 180 190 200
LSGVRPPVHV TQVTTDPETA RRWFDVFEGA GLDGLIVKPA DLPYEPGKRL
210 220 230 240 250
MFKVKHARTM DAVVAGFRWH KSGPVIGSLL LGLYDDDGVL HHIGVSSSFT
260 270 280 290 300
MARRKELLDE LEPYRDVGGE HPWVHGDHER GQRIPGGVSR WTGGKNLEWE
310 320 330 340 350
PLRPALVVEV AYDAMEGDRL RHTARFLRWR PDRDPRSCDY GQLDRPIRYD
360 370
VDEVLRGDPA ATVGDTRGRA
Length:370
Mass (Da):41,643
Last modified:October 5, 2010 - v1
Checksum:iD3008BC1CA603AC1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002162 Genomic DNA. Translation: ADL45201.1.
RefSeqiWP_013284839.1. NC_014391.1.
YP_003834777.1. NC_014391.1.

Genome annotation databases

EnsemblBacteriaiADL45201; ADL45201; Micau_1646.
GeneIDi9599723.
KEGGimau:Micau_1646.
PATRICi42389011. VBIMicAur74833_1667.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002162 Genomic DNA. Translation: ADL45201.1 .
RefSeqi WP_013284839.1. NC_014391.1.
YP_003834777.1. NC_014391.1.

3D structure databases

ProteinModelPortali D9SZR9.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADL45201 ; ADL45201 ; Micau_1646 .
GeneIDi 9599723.
KEGGi mau:Micau_1646.
PATRICi 42389011. VBIMicAur74833_1667.

Phylogenomic databases

HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.

Enzyme and pathway databases

BioCyci MAUR644283:GHOD-1668-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Micromonospora aurantiaca ATCC 27029."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Hirsch A.M., Woyke T.
    Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442Imported.

Entry informationi

Entry nameiD9SZR9_MICAI
AccessioniPrimary (citable) accession number: D9SZR9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 29, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3