D9SQ91 (D9SQ91_CLOC7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, LacI family EMBL ADL50158.1

Gene names

Ordered Locus Names:

Clocel_0378

Organism

Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) [Complete proteome] [HAMAP] EMBL ADL50158.1

Taxonomic identifier

573061 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium cellulovorans

Protein attributes

Sequence length	338 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH lacI-type DNA-binding domain. SAAS SAAS000843

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000708 SAAS SAAS000843
Ligand	DNA-binding RuleBase RU000708 SAAS SAAS000843
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D9SQ91 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 5ABA3C83C1466AF2	FASTA	338	37,508
	10 20 30 40 50 60 MAKAPSLKDV AKLAGVGLGT ASRVLNNSGP VTDEKRQAVF EAMEKLNYKP NAIARSLKSK 70 80 90 100 110 120 KTKTIGVMIP DISNPFYPEV IRGIEDVANK YSYSIFLLNT DRSREKEQKC LSVLQEKMVD 130 140 150 160 170 180 GAILMSFSVP EEIKNHINNI PIVLISSIPK NTEFVTVRID NEEAAYEAVN HLCKFGHKDI 190 200 210 220 230 240 VMISGPLSDE NAAIPRVQGY MRAMLDNGIK FSSENIVDGD FSSEWGYIAM KKILEREKIP 250 260 270 280 290 300 TAVFTHSDNL AIGAIKAIME KGLRIPEDIS IVGFDGIASS EYIYPGITTI KQPRYEMGAM 310 320 330 GMETLVKLIN GVETKKLIKM DVQLVERNSC KNLLTEDK

References

[1]

"Complete sequence of Clostridium cellulovorans 743B." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Hemme C.L., Woyke T. Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35296 / DSM 3052 / OCM 3 / 743B.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002160 Genomic DNA. Translation: ADL50158.1.
RefSeq	YP_003841922.1. NC_014393.1.
3D structure databases
ProteinModelPortal	D9SQ91.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADL50158; ADL50158; Clocel_0378.
GeneID	9607223.
KEGG	ccb:Clocel_0378.
PATRIC	41736222. VBICloCel81632203721_1909.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000220180.
Enzyme and pathway databases
BioCyc	CCEL573061:GIXD-415-MONOMER.
Family and domain databases
Gene3D	1.10.260.40. 1 hit.
InterPro	IPR010982. Lambda_DNA-bd_dom. IPR000843. Tscrpt_reg_HTH_LacI. [Graphical view]
Pfam	PF00356. LacI. 1 hit. [Graphical view]
SMART	SM00354. HTH_LACI. 1 hit. [Graphical view]
SUPFAM	SSF47413. Lambda_like_DNA. 1 hit.
PROSITE	PS00356. HTH_LACI_1. 1 hit. PS50932. HTH_LACI_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D9SQ91_CLOC7

Accession

Primary (citable) accession number: D9SQ91

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)