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D9SNE6 (D9SNE6_CLOC7) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Clocel_4279 EMBL ADL53938.1
OrganismClostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) [Complete proteome] [HAMAP] EMBL ADL53938.1
Taxonomic identifier573061 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length519 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D9SNE6 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 81A11E4783783D2B

FASTA51959,018
        10         20         30         40         50         60 
MSKWLDNAVF YEIYPQSFND TNSDGIGDIQ GIIEKLSYIQ ELGCNAIWIN PCFASPFADA 

        70         80         90        100        110        120 
GYDVEDYFNV ATRYGTNEDL KELFEKAHEK NIHVILDLVP GHTSINHPWF KESMKADENE 

       130        140        150        160        170        180 
YTHRYIWTDS IWEDFKNITS IAGCIRGISE RDGSCAVNFF STQPALNYGF ANPEKSWQFA 

       190        200        210        220        230        240 
TDSKEVIATV EAMKDVMRFW LNMGCDGFRV DMAGSLVKND VDSKETIKLW QNFRAFLDRE 

       250        260        270        280        290        300 
FPNAVLISEW GEPDKSLMGG FHMDFLLHFG PSHYLDLFRE ENPYFSREGK GDISKFVNRY 

       310        320        330        340        350        360 
MENYELTDGK GLMCIPSGNH DMGRIKQRLD DEEIKIAFAF LLTMPGAPFI YYGDEIGMNY 

       370        380        390        400        410        420 
VENLVSVEGG YGRTGSRSPM QWDDSLNAGF SDAKKEDLYI MQDSREDRPT VKNQQDTENS 

       430        440        450        460        470        480 
LYKEVQKLIK IRLENEPLCS NATIEFLCAE AKTYPLVYKR TGKEGSVLIV LNPSNKEAVS 

       490        500        510 
KVTIETTSNE VIYSNNGVAN IENDTIIAPP CSASIFKLA 

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References

[1]"Complete sequence of Clostridium cellulovorans 743B."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Hemme C.L., Woyke T.
Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35296 / DSM 3052 / OCM 3 / 743B.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002160 Genomic DNA. Translation: ADL53938.1.
RefSeqYP_003845702.1. NC_014393.1.

3D structure databases

ProteinModelPortalD9SNE6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL53938; ADL53938; Clocel_4279.
GeneID9611192.
KEGGccb:Clocel_4279.
PATRIC41734677. VBICloCel81632203721_1235.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000220640.
KOK05343.
OMACNALWIN.

Enzyme and pathway databases

BioCycCCEL573061:GIXD-4385-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD9SNE6_CLOC7
AccessionPrimary (citable) accession number: D9SNE6
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 16, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)