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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Clocel_4279

Organism
Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciCCEL573061:GIXD-4385-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Clocel_4279Imported
OrganismiClostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B)Imported
Taxonomic identifieri573061 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000002730 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi573061.Clocel_4279.

Structurei

3D structure databases

ProteinModelPortaliD9SNE6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000220640.
KOiK05343.
OMAiRMGAHTG.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D9SNE6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKWLDNAVF YEIYPQSFND TNSDGIGDIQ GIIEKLSYIQ ELGCNAIWIN
60 70 80 90 100
PCFASPFADA GYDVEDYFNV ATRYGTNEDL KELFEKAHEK NIHVILDLVP
110 120 130 140 150
GHTSINHPWF KESMKADENE YTHRYIWTDS IWEDFKNITS IAGCIRGISE
160 170 180 190 200
RDGSCAVNFF STQPALNYGF ANPEKSWQFA TDSKEVIATV EAMKDVMRFW
210 220 230 240 250
LNMGCDGFRV DMAGSLVKND VDSKETIKLW QNFRAFLDRE FPNAVLISEW
260 270 280 290 300
GEPDKSLMGG FHMDFLLHFG PSHYLDLFRE ENPYFSREGK GDISKFVNRY
310 320 330 340 350
MENYELTDGK GLMCIPSGNH DMGRIKQRLD DEEIKIAFAF LLTMPGAPFI
360 370 380 390 400
YYGDEIGMNY VENLVSVEGG YGRTGSRSPM QWDDSLNAGF SDAKKEDLYI
410 420 430 440 450
MQDSREDRPT VKNQQDTENS LYKEVQKLIK IRLENEPLCS NATIEFLCAE
460 470 480 490 500
AKTYPLVYKR TGKEGSVLIV LNPSNKEAVS KVTIETTSNE VIYSNNGVAN
510
IENDTIIAPP CSASIFKLA
Length:519
Mass (Da):59,018
Last modified:October 5, 2010 - v1
Checksum:i81A11E4783783D2B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002160 Genomic DNA. Translation: ADL53938.1.
RefSeqiWP_010074292.1. NC_014393.1.

Genome annotation databases

EnsemblBacteriaiADL53938; ADL53938; Clocel_4279.
KEGGiccb:Clocel_4279.
PATRICi41734677. VBICloCel81632203721_1235.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002160 Genomic DNA. Translation: ADL53938.1.
RefSeqiWP_010074292.1. NC_014393.1.

3D structure databases

ProteinModelPortaliD9SNE6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi573061.Clocel_4279.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADL53938; ADL53938; Clocel_4279.
KEGGiccb:Clocel_4279.
PATRICi41734677. VBICloCel81632203721_1235.

Phylogenomic databases

HOGENOMiHOG000220640.
KOiK05343.
OMAiRMGAHTG.

Enzyme and pathway databases

BioCyciCCEL573061:GIXD-4385-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35296 / DSM 3052 / OCM 3 / 743BImported.

Entry informationi

Entry nameiD9SNE6_CLOC7
AccessioniPrimary (citable) accession number: D9SNE6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: July 22, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.