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D9SNE6

- D9SNE6_CLOC7

UniProt

D9SNE6 - D9SNE6_CLOC7

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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Clocel_4279

Organism
Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCCEL573061:GIXD-4385-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Clocel_4279Imported
OrganismiClostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B)Imported
Taxonomic identifieri573061 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000002730: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD9SNE6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000220640.
KOiK05343.
OMAiYIINFFK.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D9SNE6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSKWLDNAVF YEIYPQSFND TNSDGIGDIQ GIIEKLSYIQ ELGCNAIWIN
60 70 80 90 100
PCFASPFADA GYDVEDYFNV ATRYGTNEDL KELFEKAHEK NIHVILDLVP
110 120 130 140 150
GHTSINHPWF KESMKADENE YTHRYIWTDS IWEDFKNITS IAGCIRGISE
160 170 180 190 200
RDGSCAVNFF STQPALNYGF ANPEKSWQFA TDSKEVIATV EAMKDVMRFW
210 220 230 240 250
LNMGCDGFRV DMAGSLVKND VDSKETIKLW QNFRAFLDRE FPNAVLISEW
260 270 280 290 300
GEPDKSLMGG FHMDFLLHFG PSHYLDLFRE ENPYFSREGK GDISKFVNRY
310 320 330 340 350
MENYELTDGK GLMCIPSGNH DMGRIKQRLD DEEIKIAFAF LLTMPGAPFI
360 370 380 390 400
YYGDEIGMNY VENLVSVEGG YGRTGSRSPM QWDDSLNAGF SDAKKEDLYI
410 420 430 440 450
MQDSREDRPT VKNQQDTENS LYKEVQKLIK IRLENEPLCS NATIEFLCAE
460 470 480 490 500
AKTYPLVYKR TGKEGSVLIV LNPSNKEAVS KVTIETTSNE VIYSNNGVAN
510
IENDTIIAPP CSASIFKLA
Length:519
Mass (Da):59,018
Last modified:October 5, 2010 - v1
Checksum:i81A11E4783783D2B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002160 Genomic DNA. Translation: ADL53938.1.
RefSeqiYP_003845702.1. NC_014393.1.

Genome annotation databases

EnsemblBacteriaiADL53938; ADL53938; Clocel_4279.
GeneIDi9611192.
KEGGiccb:Clocel_4279.
PATRICi41734677. VBICloCel81632203721_1235.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002160 Genomic DNA. Translation: ADL53938.1 .
RefSeqi YP_003845702.1. NC_014393.1.

3D structure databases

ProteinModelPortali D9SNE6.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADL53938 ; ADL53938 ; Clocel_4279 .
GeneIDi 9611192.
KEGGi ccb:Clocel_4279.
PATRICi 41734677. VBICloCel81632203721_1235.

Phylogenomic databases

HOGENOMi HOG000220640.
KOi K05343.
OMAi YIINFFK.

Enzyme and pathway databases

BioCyci CCEL573061:GIXD-4385-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35296 / DSM 3052 / OCM 3 / 743BImported.

Entry informationi

Entry nameiD9SNE6_CLOC7
AccessioniPrimary (citable) accession number: D9SNE6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 1, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3