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D9SNE6

- D9SNE6_CLOC7

UniProt

D9SNE6 - D9SNE6_CLOC7

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Protein
Submitted name: Alpha amylase catalytic region
Gene
Clocel_4279
Organism
Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCCEL573061:GIXD-4385-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Clocel_4279Imported
OrganismiClostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B)Imported
Taxonomic identifieri573061 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000002730: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD9SNE6.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000220640.
KOiK05343.
OMAiYIINFFK.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D9SNE6-1 [UniParc]FASTAAdd to Basket

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MSKWLDNAVF YEIYPQSFND TNSDGIGDIQ GIIEKLSYIQ ELGCNAIWIN    50
PCFASPFADA GYDVEDYFNV ATRYGTNEDL KELFEKAHEK NIHVILDLVP 100
GHTSINHPWF KESMKADENE YTHRYIWTDS IWEDFKNITS IAGCIRGISE 150
RDGSCAVNFF STQPALNYGF ANPEKSWQFA TDSKEVIATV EAMKDVMRFW 200
LNMGCDGFRV DMAGSLVKND VDSKETIKLW QNFRAFLDRE FPNAVLISEW 250
GEPDKSLMGG FHMDFLLHFG PSHYLDLFRE ENPYFSREGK GDISKFVNRY 300
MENYELTDGK GLMCIPSGNH DMGRIKQRLD DEEIKIAFAF LLTMPGAPFI 350
YYGDEIGMNY VENLVSVEGG YGRTGSRSPM QWDDSLNAGF SDAKKEDLYI 400
MQDSREDRPT VKNQQDTENS LYKEVQKLIK IRLENEPLCS NATIEFLCAE 450
AKTYPLVYKR TGKEGSVLIV LNPSNKEAVS KVTIETTSNE VIYSNNGVAN 500
IENDTIIAPP CSASIFKLA 519
Length:519
Mass (Da):59,018
Last modified:October 5, 2010 - v1
Checksum:i81A11E4783783D2B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002160 Genomic DNA. Translation: ADL53938.1.
RefSeqiYP_003845702.1. NC_014393.1.

Genome annotation databases

EnsemblBacteriaiADL53938; ADL53938; Clocel_4279.
GeneIDi9611192.
KEGGiccb:Clocel_4279.
PATRICi41734677. VBICloCel81632203721_1235.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002160 Genomic DNA. Translation: ADL53938.1 .
RefSeqi YP_003845702.1. NC_014393.1.

3D structure databases

ProteinModelPortali D9SNE6.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADL53938 ; ADL53938 ; Clocel_4279 .
GeneIDi 9611192.
KEGGi ccb:Clocel_4279.
PATRICi 41734677. VBICloCel81632203721_1235.

Phylogenomic databases

HOGENOMi HOG000220640.
KOi K05343.
OMAi YIINFFK.

Enzyme and pathway databases

BioCyci CCEL573061:GIXD-4385-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35296 / DSM 3052 / OCM 3 / 743B.

Entry informationi

Entry nameiD9SNE6_CLOC7
AccessioniPrimary (citable) accession number: D9SNE6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: May 14, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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