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D9SMK8 (D9SMK8_CLOC7) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA polymerase III subunit beta PIRNR PIRNR000804
EC=2.7.7.7 PIRNR PIRNR000804
Gene names
Ordered Locus Names:Clocel_0002
OrganismClostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) [Complete proteome] [HAMAP] EMBL ADL49793.1
Taxonomic identifier573061 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium ›

Protein attributes

Sequence length367 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA By similarity. PIRNR PIRNR000804 SAAS SAAS022634

Catalytic activity

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). PIRNR PIRNR000804 SAAS SAAS022634

Subcellular location

Cytoplasm By similarity PIRNR PIRNR000804.

Sequences

Sequence LengthMass (Da)Tools
D9SMK8 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: F07D10F62A58AF12

FASTA36740,948
        10         20         30         40         50         60 
MNFTCDKTNL QEAISIAQKA VTGKSTMPIL QGLLLNARGN KLTINSSDID LGIETKCNAN 

        70         80         90        100        110        120 
IKEEGSIVVD SKLFGDIIRK LPNSEIQIKS ISEGTIEITC QRSRFTLVHM KADEFPQLPY 

       130        140        150        160        170        180 
IDEDEIISIP QKLIKNMIRS TIFAIAIDET RPILTGILFE IKNRTLNLVA LDGFRLALKK 

       190        200        210        220        230        240 
ETIDTEQEFS AVIPGKTLHE VVKILEDEGD VDITFTTNHI LFNLGETKVV SRLLEGEFIK 

       250        260        270        280        290        300 
YQAIIPEEHE LSISVNRASL LNSIERASLV SKDASSNLIK FNISEDNIVI TSNSQLGDVR 

       310        320        330        340        350        360 
EEVSIKLLKG NELQIAFNSK YLIDALKIME EETITLQFTS AVSPCIIKNI ENDNVIYLVL 


PVRISNS

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References

[1]"Complete sequence of Clostridium cellulovorans 743B."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Hemme C.L., Woyke T.
Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35296 / DSM 3052 / OCM 3 / 743B.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002160 Genomic DNA. Translation: ADL49793.1.
RefSeqYP_003841557.1. NC_014393.1.

3D structure databases

ProteinModelPortalD9SMK8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL49793; ADL49793; Clocel_0002.
GeneID9606810.
KEGGccb:Clocel_0002.
PATRIC41734914. VBICloCel81632203721_1351.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000071792.
KOK02338.

Enzyme and pathway databases

BioCycCCEL573061:GIXD-2-MONOMER.

Family and domain databases

InterProIPR001001. DNA_polIII_beta.
IPR022635. DNA_polIII_beta_C.
IPR022637. DNA_polIII_beta_cen.
IPR022634. DNA_polIII_beta_N.
[Graphical view]
PfamPF00712. DNA_pol3_beta. 1 hit.
PF02767. DNA_pol3_beta_2. 1 hit.
PF02768. DNA_pol3_beta_3. 1 hit.
[Graphical view]
PIRSFPIRSF000804. DNA_pol_III_b. 1 hit.
SMARTSM00480. POL3Bc. 1 hit.
[Graphical view]
TIGRFAMsTIGR00663. dnan. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD9SMK8_CLOC7
AccessionPrimary (citable) accession number: D9SMK8
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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