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D9SHP6 (D9SHP6_GALCS) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length470 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Molecular functionLyase EMBL ADL54079.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D9SHP6 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 6CC37D30B388FDB6

FASTA47051,698
        10         20         30         40         50         60 
MDQSNRYANL NLKEEDLIKN GKHLLVAYKL IPAKGHGFLE VAAHVAAESS TGTNVEVSTT 

        70         80         90        100        110        120 
DDFTRGVDAL VYEIDETAFG DDIVKGGGLF KVAYPVELFD PNLTDGTYNI SHMWSLILGN 

       130        140        150        160        170        180 
NQGMGDHQGL RMLDFLVPEM MVRKFDGPSA NISNLWKVLG RSETDGGYIA GTIIKPKLGL 

       190        200        210        220        230        240 
RPEPFAKACY DFWLGGDFIK NDEPQANQPF CPMEVVMPKV AEAMDRAQQE TGQAKLFSAN 

       250        260        270        280        290        300 
ITADYYKEMI HRGDFVLETF AKYNSASHVA FLVDGFVTGP AGVTTCRREF PDTFLHFHRA 

       310        320        330        340        350        360 
GHGAVTSYKS PMGMDPLCYM KLVRLMGASG MHTGTMGYGK MEGHGKETVL AYMLERDECQ 

       370        380        390        400        410        420 
GPYFYQKWYG MKATTPIISG GMNALRLPGF FQNLGHGNVI NTCGGGAFGH IDSPAAGGIS 

       430        440        450        460        470 
LGQAYDCWKS GSDPIEYAKT HKEFARAFES FPKDGDKLFA GWREKLGVHK 

« Hide

References

[1]"Complete sequence of Gallionella capsiferriformans ES-2."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Davenport K.W., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N. expand/collapse author list , Mikhailova N., Shelobolina E.S., Picardal F., Roden E., Emerson D., Woyke T.
Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ES-2 EMBL ADL54079.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002159 Genomic DNA. Translation: ADL54079.1.
RefSeqYP_003845843.1. NC_014394.1.

3D structure databases

ProteinModelPortalD9SHP6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL54079; ADL54079; Galf_0034.
GeneID9611344.
KEGGgca:Galf_0034.
PATRIC42336609. VBIGalCap53152_0036.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000230831.
KOK01601.

Enzyme and pathway databases

BioCycGCAP395494:GHXI-34-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPMF_01339. RuBisCO_L_type2.
InterProIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD9SHP6_GALCS
AccessionPrimary (citable) accession number: D9SHP6
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: February 19, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)