D9RK04 (D9RK04_STAAK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Name:	sodA EMBL ADL65561.1
Ordered Locus Names:	SAA6008_01522 EMBL ADL65561.1

Organism

Staphylococcus aureus (strain JKD6008) [Complete proteome] [HAMAP]

Taxonomic identifier

546342 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Staphylococcaceae › Staphylococcus › Staphylococcus aureus › Staphylococcus aureus subsp. aureus

Protein attributes

Sequence length	199 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D9RK04 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: F2CEC7B4701AC559	FASTA	199	22,711
	10 20 30 40 50 60 MAFELPKLPY AFDALEPHFD KETMEIHHDR HHNTYVTKLN AAVEGTDLES KSIEEIVANL 70 80 90 100 110 120 DSVPANIQTA VRNNGGGHLN HSLFWELLSP NSEEKGTVVE KIKEQWGSLE EFKKEFADKA 130 140 150 160 170 180 AARFGSGWAW LVVNNGQLEI VTTPNQDNPL TEGKTPILGL DVWEHAYYLK YQNKRPDYIG 190 AFWNVVNWEK VDELYNATK

References

[1]

"Complete genome sequence of Staphylococcus aureus strain JKD6008, an ST239 clone of methicillin-resistant Staphylococcus aureus with intermediate-level vancomycin resistance." Howden B.P., Seemann T., Harrison P.F., McEvoy C.R., Stanton J.A., Rand C.J., Mason C.W., Jensen S.O., Firth N., Davies J.K., Johnson P.D., Stinear T.P. J. Bacteriol. 192:5848-5849(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JKD6008 EMBL ADL65561.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002120 Genomic DNA. Translation: ADL65561.1.
RefSeq	YP_005744875.1. NC_017341.1.
3D structure databases
ProteinModelPortal	D9RK04.
SMR	D9RK04. Positions 2-196.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADL65561; ADL65561; SAA6008_01522.
GeneID	12329226.
KEGG	suk:SAA6008_01522.
PATRIC	43210212. VBIStaAur110820_1606.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000013583.
KO	K04564.
OMA	PPKHELL.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D9RK04_STAAK

Accession

Primary (citable) accession number: D9RK04

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)