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D9RK04

- D9RK04_STAAK

UniProt

D9RK04 - D9RK04_STAAK

Protein

Superoxide dismutase

Gene

sodA

Organism
Staphylococcus aureus (strain JKD6008)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation
    Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Enzyme and pathway databases

    BioCyciSAUR546342:GLKM-1526-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodAImported
    Ordered Locus Names:SAA6008_01522Imported
    OrganismiStaphylococcus aureus (strain JKD6008)Imported
    Taxonomic identifieri546342 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
    ProteomesiUP000002228: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD9RK04.
    SMRiD9RK04. Positions 2-196.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000013583.
    KOiK04564.
    OMAiTIFWQIM.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D9RK04-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAFELPKLPY AFDALEPHFD KETMEIHHDR HHNTYVTKLN AAVEGTDLES    50
    KSIEEIVANL DSVPANIQTA VRNNGGGHLN HSLFWELLSP NSEEKGTVVE 100
    KIKEQWGSLE EFKKEFADKA AARFGSGWAW LVVNNGQLEI VTTPNQDNPL 150
    TEGKTPILGL DVWEHAYYLK YQNKRPDYIG AFWNVVNWEK VDELYNATK 199
    Length:199
    Mass (Da):22,711
    Last modified:October 5, 2010 - v1
    Checksum:iF2CEC7B4701AC559
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002120 Genomic DNA. Translation: ADL65561.1.
    RefSeqiYP_005744875.1. NC_017341.1.

    Genome annotation databases

    EnsemblBacteriaiADL65561; ADL65561; SAA6008_01522.
    GeneIDi12329226.
    KEGGisuk:SAA6008_01522.
    PATRICi43210212. VBIStaAur110820_1606.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002120 Genomic DNA. Translation: ADL65561.1 .
    RefSeqi YP_005744875.1. NC_017341.1.

    3D structure databases

    ProteinModelPortali D9RK04.
    SMRi D9RK04. Positions 2-196.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADL65561 ; ADL65561 ; SAA6008_01522 .
    GeneIDi 12329226.
    KEGGi suk:SAA6008_01522.
    PATRICi 43210212. VBIStaAur110820_1606.

    Phylogenomic databases

    HOGENOMi HOG000013583.
    KOi K04564.
    OMAi TIFWQIM.

    Enzyme and pathway databases

    BioCyci SAUR546342:GLKM-1526-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Staphylococcus aureus strain JKD6008, an ST239 clone of methicillin-resistant Staphylococcus aureus with intermediate-level vancomycin resistance."
      Howden B.P., Seemann T., Harrison P.F., McEvoy C.R., Stanton J.A., Rand C.J., Mason C.W., Jensen S.O., Firth N., Davies J.K., Johnson P.D., Stinear T.P.
      J. Bacteriol. 192:5848-5849(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JKD6008Imported.

    Entry informationi

    Entry nameiD9RK04_STAAK
    AccessioniPrimary (citable) accession number: D9RK04
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3