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D9RK04 (D9RK04_STAAK) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414

EC=1.15.1.1 RuleBase RU000414
Gene names
Name:sodA EMBL ADL65561.1
Ordered Locus Names:SAA6008_01522 EMBL ADL65561.1
OrganismStaphylococcus aureus (strain JKD6008) [Complete proteome] [HAMAP] EMBL ADL65561.1
Taxonomic identifier546342 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesStaphylococcus

Protein attributes

Sequence length199 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D9RK04 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: F2CEC7B4701AC559

FASTA19922,711
        10         20         30         40         50         60 
MAFELPKLPY AFDALEPHFD KETMEIHHDR HHNTYVTKLN AAVEGTDLES KSIEEIVANL 

        70         80         90        100        110        120 
DSVPANIQTA VRNNGGGHLN HSLFWELLSP NSEEKGTVVE KIKEQWGSLE EFKKEFADKA 

       130        140        150        160        170        180 
AARFGSGWAW LVVNNGQLEI VTTPNQDNPL TEGKTPILGL DVWEHAYYLK YQNKRPDYIG 

       190 
AFWNVVNWEK VDELYNATK 

« Hide

References

[1]"Complete genome sequence of Staphylococcus aureus strain JKD6008, an ST239 clone of methicillin-resistant Staphylococcus aureus with intermediate-level vancomycin resistance."
Howden B.P., Seemann T., Harrison P.F., McEvoy C.R., Stanton J.A., Rand C.J., Mason C.W., Jensen S.O., Firth N., Davies J.K., Johnson P.D., Stinear T.P.
J. Bacteriol. 192:5848-5849(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JKD6008 EMBL ADL65561.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002120 Genomic DNA. Translation: ADL65561.1.
RefSeqYP_005744875.1. NC_017341.1.

3D structure databases

ProteinModelPortalD9RK04.
SMRD9RK04. Positions 2-196.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL65561; ADL65561; SAA6008_01522.
GeneID12329226.
KEGGsuk:SAA6008_01522.
PATRIC43210212. VBIStaAur110820_1606.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000013583.
KOK04564.
OMADYISAFW.

Enzyme and pathway databases

BioCycSAUR546342:GLKM-1526-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD9RK04_STAAK
AccessionPrimary (citable) accession number: D9RK04
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 16, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)