Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

D9RAW4 (D9RAW4_CLOSW) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Closa_3638 EMBL ADL06161.1
OrganismClostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) [Complete proteome] [HAMAP] EMBL ADL06161.1
Taxonomic identifier610130 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length308 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
D9RAW4 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 8C3BA2B4A618164A

FASTA30835,912
        10         20         30         40         50         60 
MMDLFDLKNV SPMLISEMAD PFDSPDHIFE IKWDGIRCIS FLNTETDMRN KRNKLMIPIF 

        70         80         90        100        110        120 
PELANLHKQV KEKCILDHEL LVIKNGIPDF YEVQNRALRT NSFKIKLAAD RYPASIIAYD 

       130        140        150        160        170        180 
ILYYKDKDIT MLPLMERKKY LTDVVIENQL ISVSRYVEND GVKLFELVKE KNLEGIIAKR 

       190        200        210        220        230        240 
KDSLYWQGKR TRDWVKCKIM SSDDCVICGY IPKENNMTSL ILGQYDEDVL VYKGHVTLGV 

       250        260        270        280        290        300 
SLRILNQHKY KVIDYSPFGY IPHGNEEAVW LAPELVCIVE SMPTEKETFR QPVFKGIRDD 


KLAIECKI 

« Hide

References

[1]"Complete sequence of Clostridium saccharolyticum WM1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N. expand/collapse author list , Mouttaki H., Lin L., Zhou J., Hemme C.L., Woyke T.
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35040 / DSM 2544 / NRCC 2533 / WM1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002109 Genomic DNA. Translation: ADL06161.1.
RefSeqYP_003823784.1. NC_014376.1.

3D structure databases

ProteinModelPortalD9RAW4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL06161; ADL06161; Closa_3638.
GeneID9508956.
KEGGcsh:Closa_3638.
PATRIC42269139. VBICloSac91065_3926.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMACIESEAF.

Enzyme and pathway databases

BioCycCSAC610130:GHTP-3718-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD9RAW4_CLOSW
AccessionPrimary (citable) accession number: D9RAW4
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 16, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)