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D9RAW4

- D9RAW4_CLOSW

UniProt

D9RAW4 - D9RAW4_CLOSW

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Closa_3638
Organism
Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCSAC610130:GHTP-3718-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Closa_3638Imported
OrganismiClostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1)Imported
Taxonomic identifieri610130 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesLachnospiraceae
ProteomesiUP000001662: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD9RAW4.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiWEGLIAK.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D9RAW4-1 [UniParc]FASTAAdd to Basket

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MMDLFDLKNV SPMLISEMAD PFDSPDHIFE IKWDGIRCIS FLNTETDMRN    50
KRNKLMIPIF PELANLHKQV KEKCILDHEL LVIKNGIPDF YEVQNRALRT 100
NSFKIKLAAD RYPASIIAYD ILYYKDKDIT MLPLMERKKY LTDVVIENQL 150
ISVSRYVEND GVKLFELVKE KNLEGIIAKR KDSLYWQGKR TRDWVKCKIM 200
SSDDCVICGY IPKENNMTSL ILGQYDEDVL VYKGHVTLGV SLRILNQHKY 250
KVIDYSPFGY IPHGNEEAVW LAPELVCIVE SMPTEKETFR QPVFKGIRDD 300
KLAIECKI 308
Length:308
Mass (Da):35,912
Last modified:October 5, 2010 - v1
Checksum:i8C3BA2B4A618164A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002109 Genomic DNA. Translation: ADL06161.1.
RefSeqiYP_003823784.1. NC_014376.1.

Genome annotation databases

EnsemblBacteriaiADL06161; ADL06161; Closa_3638.
GeneIDi9508956.
KEGGicsh:Closa_3638.
PATRICi42269139. VBICloSac91065_3926.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002109 Genomic DNA. Translation: ADL06161.1 .
RefSeqi YP_003823784.1. NC_014376.1.

3D structure databases

ProteinModelPortali D9RAW4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADL06161 ; ADL06161 ; Closa_3638 .
GeneIDi 9508956.
KEGGi csh:Closa_3638.
PATRICi 42269139. VBICloSac91065_3926.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi WEGLIAK.

Enzyme and pathway databases

BioCyci CSAC610130:GHTP-3718-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35040 / DSM 2544 / NRCC 2533 / WM1.

Entry informationi

Entry nameiD9RAW4_CLOSW
AccessioniPrimary (citable) accession number: D9RAW4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: September 3, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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