D9RAW4 (D9RAW4_CLOSW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADL06161.1

Gene names

Ordered Locus Names:

Closa_3638

Organism

Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) [Complete proteome] [HAMAP] EMBL ADL06161.1

Taxonomic identifier

610130 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium saccharolyticum

Protein attributes

Sequence length	308 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADL06161.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D9RAW4 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 8C3BA2B4A618164A	FASTA	308	35,912
	10 20 30 40 50 60 MMDLFDLKNV SPMLISEMAD PFDSPDHIFE IKWDGIRCIS FLNTETDMRN KRNKLMIPIF 70 80 90 100 110 120 PELANLHKQV KEKCILDHEL LVIKNGIPDF YEVQNRALRT NSFKIKLAAD RYPASIIAYD 130 140 150 160 170 180 ILYYKDKDIT MLPLMERKKY LTDVVIENQL ISVSRYVEND GVKLFELVKE KNLEGIIAKR 190 200 210 220 230 240 KDSLYWQGKR TRDWVKCKIM SSDDCVICGY IPKENNMTSL ILGQYDEDVL VYKGHVTLGV 250 260 270 280 290 300 SLRILNQHKY KVIDYSPFGY IPHGNEEAVW LAPELVCIVE SMPTEKETFR QPVFKGIRDD KLAIECKI

References

[1]

"Complete sequence of Clostridium saccharolyticum WM1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N. , Mouttaki H., Lin L., Zhou J., Hemme C.L., Woyke T. Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35040 / DSM 2544 / NRCC 2533 / WM1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002109 Genomic DNA. Translation: ADL06161.1.
RefSeq	YP_003823784.1. NC_014376.1.
3D structure databases
ProteinModelPortal	D9RAW4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADL06161; ADL06161; Closa_3638.
GeneID	9508956.
KEGG	csh:Closa_3638.
PATRIC	42269139. VBICloSac91065_3926.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000222509.
KO	K01971.
Enzyme and pathway databases
BioCyc	CSAC610130:GHTP-3717-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D9RAW4_CLOSW

Accession

Primary (citable) accession number: D9RAW4

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)