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D9R943

- D9R943_CLOSW

UniProt

D9R943 - D9R943_CLOSW

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Closa_1417

Organism
Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCSAC610130:GHTP-1468-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Closa_1417Imported
OrganismiClostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1)Imported
Taxonomic identifieri610130 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesLachnospiraceae
ProteomesiUP000001662: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD9R943.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiGVRIITR.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D9R943-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDIFDIKKIS PMLISEMMDP FDSPDYIYEI KWDGIRCVSY LGTDTDIRNK
60 70 80 90 100
RNKLMAPLFP ELKNLHAQVK TKCILDHELL VLKNGVPDFY EVQKRALMAN
110 120 130 140 150
SFKIKLAADR YPASIIAYDI LYYKDKDITM LPLMERKKYL QDVVIENNMI
160 170 180 190 200
SVSRYVENEG IMLFDLVKEK GLEGVVAKRK NSLYWQGKRS KDWIKFKVMA
210 220 230 240 250
TDDCIICGYI VKEKSMPSLI LGQYDDDVLV YKGHVSLGVS LRILNQYKYQ
260 270 280 290 300
IIDYSPFGYV PAGNENAVWL APDLVCIVES MPTDKDSFRQ PVFKGIRNDK

SAIECKV
Length:307
Mass (Da):35,480
Last modified:October 5, 2010 - v1
Checksum:iB12DB34AF16E8D8E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002109 Genomic DNA. Translation: ADL04018.1.
RefSeqiYP_003821641.1. NC_014376.1.

Genome annotation databases

EnsemblBacteriaiADL04018; ADL04018; Closa_1417.
GeneIDi9506705.
KEGGicsh:Closa_1417.
PATRICi42264308. VBICloSac91065_1533.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002109 Genomic DNA. Translation: ADL04018.1 .
RefSeqi YP_003821641.1. NC_014376.1.

3D structure databases

ProteinModelPortali D9R943.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADL04018 ; ADL04018 ; Closa_1417 .
GeneIDi 9506705.
KEGGi csh:Closa_1417.
PATRICi 42264308. VBICloSac91065_1533.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi GVRIITR.

Enzyme and pathway databases

BioCyci CSAC610130:GHTP-1468-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35040 / DSM 2544 / NRCC 2533 / WM1Imported.

Entry informationi

Entry nameiD9R943_CLOSW
AccessioniPrimary (citable) accession number: D9R943
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 29, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3