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D9R943

- D9R943_CLOSW

UniProt

D9R943 - D9R943_CLOSW

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Closa_1417
Organism
Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCSAC610130:GHTP-1468-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Closa_1417Imported
OrganismiClostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1)Imported
Taxonomic identifieri610130 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesLachnospiraceae
ProteomesiUP000001662: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD9R943.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiGVRIITR.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D9R943-1 [UniParc]FASTAAdd to Basket

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MDIFDIKKIS PMLISEMMDP FDSPDYIYEI KWDGIRCVSY LGTDTDIRNK    50
RNKLMAPLFP ELKNLHAQVK TKCILDHELL VLKNGVPDFY EVQKRALMAN 100
SFKIKLAADR YPASIIAYDI LYYKDKDITM LPLMERKKYL QDVVIENNMI 150
SVSRYVENEG IMLFDLVKEK GLEGVVAKRK NSLYWQGKRS KDWIKFKVMA 200
TDDCIICGYI VKEKSMPSLI LGQYDDDVLV YKGHVSLGVS LRILNQYKYQ 250
IIDYSPFGYV PAGNENAVWL APDLVCIVES MPTDKDSFRQ PVFKGIRNDK 300
SAIECKV 307
Length:307
Mass (Da):35,480
Last modified:October 5, 2010 - v1
Checksum:iB12DB34AF16E8D8E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002109 Genomic DNA. Translation: ADL04018.1.
RefSeqiWP_013272109.1. NC_014376.1.
YP_003821641.1. NC_014376.1.

Genome annotation databases

EnsemblBacteriaiADL04018; ADL04018; Closa_1417.
GeneIDi9506705.
KEGGicsh:Closa_1417.
PATRICi42264308. VBICloSac91065_1533.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002109 Genomic DNA. Translation: ADL04018.1 .
RefSeqi WP_013272109.1. NC_014376.1.
YP_003821641.1. NC_014376.1.

3D structure databases

ProteinModelPortali D9R943.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADL04018 ; ADL04018 ; Closa_1417 .
GeneIDi 9506705.
KEGGi csh:Closa_1417.
PATRICi 42264308. VBICloSac91065_1533.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi GVRIITR.

Enzyme and pathway databases

BioCyci CSAC610130:GHTP-1468-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35040 / DSM 2544 / NRCC 2533 / WM1.

Entry informationi

Entry nameiD9R943_CLOSW
AccessioniPrimary (citable) accession number: D9R943
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: September 3, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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