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D9R943

- D9R943_CLOSW

UniProt

D9R943 - D9R943_CLOSW

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Closa_1417

Organism
Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCSAC610130:GHTP-1468-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Closa_1417Imported
    OrganismiClostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1)Imported
    Taxonomic identifieri610130 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesLachnospiraceae
    ProteomesiUP000001662: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD9R943.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiGVRIITR.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D9R943-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDIFDIKKIS PMLISEMMDP FDSPDYIYEI KWDGIRCVSY LGTDTDIRNK    50
    RNKLMAPLFP ELKNLHAQVK TKCILDHELL VLKNGVPDFY EVQKRALMAN 100
    SFKIKLAADR YPASIIAYDI LYYKDKDITM LPLMERKKYL QDVVIENNMI 150
    SVSRYVENEG IMLFDLVKEK GLEGVVAKRK NSLYWQGKRS KDWIKFKVMA 200
    TDDCIICGYI VKEKSMPSLI LGQYDDDVLV YKGHVSLGVS LRILNQYKYQ 250
    IIDYSPFGYV PAGNENAVWL APDLVCIVES MPTDKDSFRQ PVFKGIRNDK 300
    SAIECKV 307
    Length:307
    Mass (Da):35,480
    Last modified:October 5, 2010 - v1
    Checksum:iB12DB34AF16E8D8E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002109 Genomic DNA. Translation: ADL04018.1.
    RefSeqiWP_013272109.1. NC_014376.1.
    YP_003821641.1. NC_014376.1.

    Genome annotation databases

    EnsemblBacteriaiADL04018; ADL04018; Closa_1417.
    GeneIDi9506705.
    KEGGicsh:Closa_1417.
    PATRICi42264308. VBICloSac91065_1533.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002109 Genomic DNA. Translation: ADL04018.1 .
    RefSeqi WP_013272109.1. NC_014376.1.
    YP_003821641.1. NC_014376.1.

    3D structure databases

    ProteinModelPortali D9R943.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADL04018 ; ADL04018 ; Closa_1417 .
    GeneIDi 9506705.
    KEGGi csh:Closa_1417.
    PATRICi 42264308. VBICloSac91065_1533.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi GVRIITR.

    Enzyme and pathway databases

    BioCyci CSAC610130:GHTP-1468-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 35040 / DSM 2544 / NRCC 2533 / WM1Imported.

    Entry informationi

    Entry nameiD9R943_CLOSW
    AccessioniPrimary (citable) accession number: D9R943
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3