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D9R943 (D9R943_CLOSW) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Closa_1417 EMBL ADL04018.1
OrganismClostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) [Complete proteome] [HAMAP] EMBL ADL04018.1
Taxonomic identifier610130 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length307 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
D9R943 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: B12DB34AF16E8D8E

FASTA30735,480
        10         20         30         40         50         60 
MDIFDIKKIS PMLISEMMDP FDSPDYIYEI KWDGIRCVSY LGTDTDIRNK RNKLMAPLFP 

        70         80         90        100        110        120 
ELKNLHAQVK TKCILDHELL VLKNGVPDFY EVQKRALMAN SFKIKLAADR YPASIIAYDI 

       130        140        150        160        170        180 
LYYKDKDITM LPLMERKKYL QDVVIENNMI SVSRYVENEG IMLFDLVKEK GLEGVVAKRK 

       190        200        210        220        230        240 
NSLYWQGKRS KDWIKFKVMA TDDCIICGYI VKEKSMPSLI LGQYDDDVLV YKGHVSLGVS 

       250        260        270        280        290        300 
LRILNQYKYQ IIDYSPFGYV PAGNENAVWL APDLVCIVES MPTDKDSFRQ PVFKGIRNDK 


SAIECKV 

« Hide

References

[1]"Complete sequence of Clostridium saccharolyticum WM1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N. expand/collapse author list , Mouttaki H., Lin L., Zhou J., Hemme C.L., Woyke T.
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35040 / DSM 2544 / NRCC 2533 / WM1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002109 Genomic DNA. Translation: ADL04018.1.
RefSeqYP_003821641.1. NC_014376.1.

3D structure databases

ProteinModelPortalD9R943.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL04018; ADL04018; Closa_1417.
GeneID9506705.
KEGGcsh:Closa_1417.
PATRIC42264308. VBICloSac91065_1533.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMAATYNIFD.

Enzyme and pathway databases

BioCycCSAC610130:GHTP-1468-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD9R943_CLOSW
AccessionPrimary (citable) accession number: D9R943
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 16, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)