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D9R399 (D9R399_CLOSW) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length188 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. SAAS SAAS020634 HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity SAAS SAAS020634 HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. RuleBase RU004165 HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding82 – 854ATP By similarity HAMAP-Rule MF_00124

Sites

Active site831Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1401Zinc By similarity HAMAP-Rule MF_00124
Metal binding1421Zinc By similarity HAMAP-Rule MF_00124
Metal binding1771Zinc By similarity HAMAP-Rule MF_00124
Metal binding1801Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
D9R399 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: CC098E99EE759E61

FASTA18821,670
        10         20         30         40         50         60 
MAKLYFRYGA MGSSKTANAL MTRYNYMEKG KKVLLVKPDI ETRDGRKKIK SRIGLEADCI 

        70         80         90        100        110        120 
LWSEFKNYDF KFINNLDAVI VDEVQFLSEA DIDQLSNIVD EYHIPVFCYG LRIDFTSHLF 

       130        140        150        160        170        180 
SGSKRLMELA DEIEELKTVC WCGNHANMNA RIDENGNIVR TGQQVSMGAN DKYVSLCRKH 


YKEGKIKQ 

« Hide

References

[1]"Complete sequence of Clostridium saccharolyticum WM1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N. expand/collapse author list , Mouttaki H., Lin L., Zhou J., Hemme C.L., Woyke T.
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35040 / DSM 2544 / NRCC 2533 / WM1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002109 Genomic DNA. Translation: ADL04848.1.
RefSeqYP_003822471.1. NC_014376.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL04848; ADL04848; Closa_2271.
GeneID9507569.
KEGGcsh:Closa_2271.
PATRIC42266164. VBICloSac91065_2456.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000076391.
KOK00857.
OMAELKTVCH.

Enzyme and pathway databases

BioCycCSAC610130:GHTP-2331-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD9R399_CLOSW
AccessionPrimary (citable) accession number: D9R399
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: June 11, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)