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D9QZS4 (D9QZS4_CLOSW) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:Closa_3780
OrganismClostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) [Complete proteome] [HAMAP] EMBL ADL06300.1
Taxonomic identifier610130 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium ›

Protein attributes

Sequence length397 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding82 – 865GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding137 – 1404GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
D9QZS4 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: CAC960E752F87FB6

FASTA39743,921
        10         20         30         40         50         60 
MAKAKFERNK THCNIGTIGH VDHGKTTLTA AITKTLHERL GTGQAVAFEN IDKAPEERER 

        70         80         90        100        110        120 
GITISTSHVE YETEKRHYAH VDCPGHADYV KNMITGAAQM DGAILVVAAT DGVMAQTREH 

       130        140        150        160        170        180 
ILLSRQVGVP YIVVFMNKCD MVDDAELLEL VDMEIRELLN EYEFPGDDTP IIQGSALKAL 

       190        200        210        220        230        240 
EDPSSSWGDK VLELMAAVDE WIPDPVRETD KPFLMPIEDV FSITGRGTVA TGRVERGTLH 

       250        260        270        280        290        300 
VSDEVEIVGI HEETRKVVVT GIEMFRKLLD EAQAGDNIGA LLRGVQRTEI ERGQCLVKPG 

       310        320        330        340        350        360 
SVKCHKKFTA QVYVLTKDEG GRHTPFFNNY RPQFYFRTTD VTGVCDLPAG TEMCMPGDNV 

       370        380        390 
EMSVELIHPV AMEQGLRFAI REGGRTVGSG RVVTIVE

« Hide

References

[1]"Complete sequence of Clostridium saccharolyticum WM1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N. expand/collapse author list , Mouttaki H., Lin L., Zhou J., Hemme C.L., Woyke T.
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35040 / DSM 2544 / NRCC 2533 / WM1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002109 Genomic DNA. Translation: ADL06300.1.
RefSeqYP_003823923.1. NC_014376.1.

3D structure databases

ProteinModelPortalD9QZS4.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL06300; ADL06300; Closa_3780.
GeneID9509098.
KEGGcsh:Closa_3780.
PATRIC42269453. VBICloSac91065_4084.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229290.
KOK02358.

Enzyme and pathway databases

BioCycCSAC610130:GHTP-3860-MONOMER.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD9QZS4_CLOSW
AccessionPrimary (citable) accession number: D9QZS4
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: May 29, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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