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D9QTD4 (D9QTD4_ACEAZ) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:Acear_0147 EMBL ADL11698.1, Acear_0160 EMBL ADL11711.1
OrganismAcetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) [Complete proteome] [HAMAP] EMBL ADL11698.1
Taxonomic identifier574087 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaHalanaerobialesHalobacteroidaceaeAcetohalobium

Protein attributes

Sequence length398 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding80 – 845GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding135 – 1384GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
D9QTD4 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: 95FB7611DDA2597A

FASTA39843,870
        10         20         30         40         50         60 
MAKEKFERDK PHMNIGTIGH VDHGKTTTTA AITKVLSKGE EGSANFEDID NAPEEQERGI 

        70         80         90        100        110        120 
TIATSHVEYE TENRHYAHVD CPGHADYVKN MITGAAQMDG ALLVVSAADG PMPQTREHLL 

       130        140        150        160        170        180 
LARQVNVPNI VVFLNKADMV DDEELIELVE MEVRELLNEY DFNGDEVPII VGSGLKALEC 

       190        200        210        220        230        240 
GCGDRDCEWC GQILELMDAI DEYLPEPERD TDKPFLLPVE DVFTIKGRGT VATGRLERGK 

       250        260        270        280        290        300 
LHPGDEAELV GVKDTQETVV TGVEMFRKML DEAVAGDNIG ALLRGVDREE IERGQVLAEP 

       310        320        330        340        350        360 
GSITPHTEFE AEVYVLSKDE GGRHTPFFDG YRPQFYFRTT DVTGDINLPD DVEMVMPGDN 

       370        380        390 
VEMGVKLITP IAMEEGLRFA IREGGKTVGA GVITEIIE 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Acetohalobium arabaticum type strain (Z-7288)."
Sikorski J., Lapidus A., Chertkov O., Lucas S., Copeland A., Glavina Del Rio T., Nolan M., Tice H., Cheng J., Han C., Brambilla E., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Bruce D. expand/collapse author list , Detter C., Tapia R., Goodwin L., Chen A., Palaniappan K., Land M., Hauser L., Chang Y., Jeffries C., Rohde M., Goker M., Spring S., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H.
Stand. Genomic Sci. 3:57-65(2010)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49924 / DSM 5501 / Z-7288.
[2]"Complete genome sequence of Acetohalobium arabaticum type strain (Z-7288)."
Sikorski J., Lapidus A., Chertkov O., Lucas S., Copeland A., Glavina Del Rio T., Nolan M., Tice H., Cheng J.F., Han C., Brambilla E., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Bruce D. expand/collapse author list , Detter C., Tapia R., Goodwin L., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Goker M., Spring S., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.
Stand. Genomic Sci. 3:57-65(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 5501 EMBL ADL11698.1.
[3]"The complete genome of Acetohalobium arabaticum DSM 5501."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Chertkov O., Brettin T., Detter J.C., Han C., Tapia R. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H.G., Schneider S., Klenk H.-P., Eisen J.A.
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 5501 EMBL ADL11698.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002105 Genomic DNA. Translation: ADL11698.1.
CP002105 Genomic DNA. Translation: ADL11711.1.
RefSeqYP_003826763.1. NC_014378.1.
YP_003826776.1. NC_014378.1.

3D structure databases

ProteinModelPortalD9QTD4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADL11698; ADL11698; Acear_0147.
ADL11711; ADL11711; Acear_0160.
GeneID9512149.
9512162.
KEGGaar:Acear_0147.
aar:Acear_0160.
PATRIC42134409. VBIAceAra30843_0153.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229290.
KOK02358.

Enzyme and pathway databases

BioCycAARA574087:GHPK-173-MONOMER.
AARA574087:GHPK-186-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD9QTD4_ACEAZ
AccessionPrimary (citable) accession number: D9QTD4
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: June 11, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)