D9QTD4 (D9QTD4_ACEAZ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118

Gene names

Name:	tuf HAMAP-Rule MF_00118
Ordered Locus Names:	Acear_0147, Acear_0160

Organism

Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) [Complete proteome] [HAMAP] EMBL ADL11698.1

Taxonomic identifier

574087 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Halanaerobiales › Halobacteroidaceae › Acetohalobium › Acetohalobium arabaticum

Protein attributes

Sequence length	398 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118
Subunit structure	Monomer By similarity. HAMAP-Rule MF_00118
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00118.
Sequence similarities	Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm HAMAP-Rule MF_00118
Ligand	GTP-binding RuleBase RU000323 HAMAP-Rule MF_00118 Nucleotide-binding
Molecular function	Elongation factor RuleBase RU000325 HAMAP-Rule MF_00118 EMBL ADL11698.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	GTP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	GTP binding Inferred from electronic annotation. Source: HAMAP GTPase activity Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	19 – 26	8	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	80 – 84	5	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	135 – 138	4	GTP By similarity HAMAP-Rule MF_00118

Sequences

	Sequence		Length	Mass (Da)
	D9QTD4 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 95FB7611DDA2597A	FASTA	398	43,870
	10 20 30 40 50 60 MAKEKFERDK PHMNIGTIGH VDHGKTTTTA AITKVLSKGE EGSANFEDID NAPEEQERGI 70 80 90 100 110 120 TIATSHVEYE TENRHYAHVD CPGHADYVKN MITGAAQMDG ALLVVSAADG PMPQTREHLL 130 140 150 160 170 180 LARQVNVPNI VVFLNKADMV DDEELIELVE MEVRELLNEY DFNGDEVPII VGSGLKALEC 190 200 210 220 230 240 GCGDRDCEWC GQILELMDAI DEYLPEPERD TDKPFLLPVE DVFTIKGRGT VATGRLERGK 250 260 270 280 290 300 LHPGDEAELV GVKDTQETVV TGVEMFRKML DEAVAGDNIG ALLRGVDREE IERGQVLAEP 310 320 330 340 350 360 GSITPHTEFE AEVYVLSKDE GGRHTPFFDG YRPQFYFRTT DVTGDINLPD DVEMVMPGDN 370 380 390 VEMGVKLITP IAMEEGLRFA IREGGKTVGA GVITEIIE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Acetohalobium arabaticum type strain (Z-7288)." Sikorski J., Lapidus A., Chertkov O., Lucas S., Copeland A., Glavina Del Rio T., Nolan M., Tice H., Cheng J., Han C., Brambilla E., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Bruce D. , Detter C., Tapia R., Goodwin L., Chen A., Palaniappan K., Land M., Hauser L., Chang Y., Jeffries C., Rohde M., Goker M., Spring S., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H. Stand. Genomic Sci. 3:57-65(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49924 / DSM 5501 / Z-7288.
[2]	"The complete genome of Acetohalobium arabaticum DSM 5501." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Chertkov O., Brettin T., Detter J.C., Han C., Tapia R. , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H.G., Schneider S., Klenk H.-P., Eisen J.A. Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DSM 5501.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002105 Genomic DNA. Translation: ADL11698.1. CP002105 Genomic DNA. Translation: ADL11711.1.
RefSeq	YP_003826763.1. NC_014378.1. YP_003826776.1. NC_014378.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADL11698; ADL11698; Acear_0147. ADL11711; ADL11711; Acear_0160.
GeneID	9512149. 9512162.
KEGG	aar:Acear_0147. aar:Acear_0160.
PATRIC	42134409. VBIAceAra30843_0153.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000229290.
KO	K02358.
Enzyme and pathway databases
BioCyc	AARA574087:GHPK-173-MONOMER. AARA574087:GHPK-186-MONOMER.
Family and domain databases
HAMAP	MF_00118_B. EF_Tu_B.
InterPro	IPR000795. EF_GTP-bd_dom. IPR005225. Small_GTP-bd_dom. IPR009001. Transl_elong_EF1A/Init_IF2_C. IPR004161. Transl_elong_EFTu/EF1A_2. IPR004541. Transl_elong_EFTu/EF1A_bac/org. IPR004160. Transl_elong_EFTu/EF1A_C. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view]
Pfam	PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. PF03143. GTP_EFTU_D3. 1 hit. [Graphical view]
PRINTS	PR00315. ELONGATNFCT.
SUPFAM	SSF50465. Elong_init_C. 1 hit. SSF50447. Translat_factor. 1 hit.
TIGRFAMs	TIGR00485. EF-Tu. 1 hit. TIGR00231. small_GTP. 1 hit.
PROSITE	PS00301. EFACTOR_GTP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D9QTD4_ACEAZ

Accession

Primary (citable) accession number: D9QTD4

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)