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D9QKL0

- D9QKL0_BRESC

UniProt

D9QKL0 - D9QKL0_BRESC

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Protein
Submitted name:

DNA ligase D

Gene
Bresu_0521
Organism
Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) (Caulobacter subvibrioides)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBSUB633149:GHJJ-524-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase DImported
Gene namesi
Ordered Locus Names:Bresu_0521Imported
OrganismiBrevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) (Caulobacter subvibrioides)Imported
Taxonomic identifieri633149 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaeBrevundimonas
ProteomesiUP000002696: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiRTETWAK.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D9QKL0-1 [UniParc]FASTAAdd to Basket

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MKGELKTYQA KRRFAETPEP KGTKATRKGA APLRYLIQRH AATRLHYDFR    50
IEFDGVLKSW AVTKAPSRDT TVKRLAVEVE DHPLDYGSFE GTIPDGNYGA 100
GTVQLWDTGT WSPRHPETLE ADWAKGSIKM DLDGERLKGG WALVRLKSDR 150
GKPSKWANWL LLKEKDAHAV PGEGDALAEI DASITTGRSL AEIAAGKTPG 200
TPTRPTGRKA AARPKAAPSG ATLSKPPAFT PIQLCKVADH PPSGAGWAHE 250
IKFDGYRVQI ATGGGKARLY TRSGLDWSQK FPEVVADAAR WPDGVIDGEL 300
CALDPDHMPD FPALQAAISA GRTADLVFFA FDLLSEGTED LREKPLSHRK 350
ARLSGHIDRM SRAARDRIRY VDHFASTGQA VLESACRMDL EGVISKKLDA 400
PYTAGRSSTW LKSKCRGGDE VVIGGWSSEN GTRFRSLLVG VREGEGLRYL 450
GRVGTGYSQA VMKTLLPALK AAASDASPFA GKGAPRGGRD IHWLKPVLVA 500
EVTHGGYTES GSLRQAAFKG LRADKPAAEV TERPQTPTPT GKAAPATDLH 550
VPGEPAPLAS ARGKVVVAGV TISNPDKILW PARDGHPAIT KAELARYYEA 600
AADRILPHVA DRPTSIIRAP EGVGGETFFQ RHAMPGSNPR LKLIDVHERK 650
PYVAVVDVGG LVAIGQSGGL ELHPWGCAPG EPEIPDQVTF DLDPDEGLDF 700
EDVISAARVV RKKLEALGLH PFVKTTGGKG LHVVVPIKTD ARSRVTWDQN 750
KAFAKGVSEA IRAEAPDRFT TTLAKKARGG KIFLDYLRNG RMATAVAPWS 800
PRARPGAGIA FPLAWTQVKA GLDPTAFSLR TYPALLKKPD PWKDFRVSAV 850
SLKGALKKL 859
Length:859
Mass (Da):92,688
Last modified:October 5, 2010 - v1
Checksum:i730D210221BE2DEB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002102 Genomic DNA. Translation: ADK99835.1.
RefSeqiYP_003817459.1. NC_014375.1.

Genome annotation databases

EnsemblBacteriaiADK99835; ADK99835; Bresu_0521.
GeneIDi9502367.
KEGGibsb:Bresu_0521.
PATRICi42200176. VBIBreSub37974_0528.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002102 Genomic DNA. Translation: ADK99835.1 .
RefSeqi YP_003817459.1. NC_014375.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADK99835 ; ADK99835 ; Bresu_0521 .
GeneIDi 9502367.
KEGGi bsb:Bresu_0521.
PATRICi 42200176. VBIBreSub37974_0528.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi RTETWAK.

Enzyme and pathway databases

BioCyci BSUB633149:GHJJ-524-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81.

Entry informationi

Entry nameiD9QKL0_BRESC
AccessioniPrimary (citable) accession number: D9QKL0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: May 14, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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