Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

F420-reducing hydrogenase, subunit gamma

Gene

frhG

Organism
Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg) (Methanobacterium thermoautotrophicum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi56Iron-sulfur (4Fe-4S) 1Combined sources1
Metal bindingi56Iron-sulfur (4Fe-4S) 2Combined sources1
Metal bindingi57Iron-sulfur (4Fe-4S) 1Combined sources1
Metal bindingi59Iron-sulfur (4Fe-4S) 2Combined sources1
Metal bindingi60Iron-sulfur (4Fe-4S) 1Combined sources1
Metal bindingi131Iron-sulfur (4Fe-4S) 1; via amide nitrogenCombined sources1
Metal bindingi132Iron-sulfur (4Fe-4S) 1Combined sources1
Metal bindingi171Iron-sulfur (4Fe-4S) 1Combined sources1
Metal bindingi220Iron-sulfur (4Fe-4S) 4Combined sources1
Metal bindingi223Iron-sulfur (4Fe-4S) 4Combined sources1
Metal bindingi224Iron-sulfur (4Fe-4S) 4; via amide nitrogenCombined sources1
Metal bindingi224Iron-sulfur (4Fe-4S) 5Combined sources1
Metal bindingi225Iron-sulfur (4Fe-4S) 4Combined sources1
Metal bindingi226Iron-sulfur (4Fe-4S) 4Combined sources1
Metal bindingi230Iron-sulfur (4Fe-4S) 3Combined sources1
Metal bindingi232Iron-sulfur (4Fe-4S) 3Combined sources1
Metal bindingi235Iron-sulfur (4Fe-4S) 3Combined sources1
Metal bindingi249Iron-sulfur (4Fe-4S) 3Combined sources1
Metal bindingi251Iron-sulfur (4Fe-4S) 7Combined sources1
Metal bindingi252Iron-sulfur (4Fe-4S) 3Combined sources1
Metal bindingi255Iron-sulfur (4Fe-4S) 3Combined sources1
Metal bindingi255Iron-sulfur (4Fe-4S) 7Combined sources1
Metal bindingi259Iron-sulfur (4Fe-4S) 4Combined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Keywords - Ligandi

4Fe-4SCombined sources, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
F420-reducing hydrogenase, subunit gammaImported (EC:1.12.98.1Imported)
Gene namesi
Name:frhGImported
Ordered Locus Names:MTBMA_c16840Imported
OrganismiMethanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg) (Methanobacterium thermoautotrophicum)Imported
Taxonomic identifieri79929 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanothermobacter
Proteomesi
  • UP000000345 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi79929.MTBMA_c16840.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3ZFSelectron microscopy4.00B1-275[»]
4CI0electron microscopy3.36B1-275[»]
4OMFX-ray1.71G1-275[»]
SMRiD9PYF7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini211 – 2404Fe-4S ferredoxin-typeInterPro annotationAdd BLAST30
Domaini241 – 2694Fe-4S ferredoxin-typeInterPro annotationAdd BLAST29

Phylogenomic databases

eggNOGiarCOG02473. Archaea.
COG1941. LUCA.
HOGENOMiHOG000236993.
KOiK00443.
OMAiDMEYLQP.

Family and domain databases

Gene3Di3.40.50.700. 1 hit.
InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR017681. Coenz_F420_hydrogenase_gsu.
IPR006137. NADH_UbQ_OxRdtase-like_20kDa.
[Graphical view]
PfamiPF00037. Fer4. 2 hits.
PF01058. Oxidored_q6. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03294. FrhG. 1 hit.
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D9PYF7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLIARIKRF LGLEAEAKRE EPEKEKSEPV GASKEEVEKV AEENAKPRIG
60 70 80 90 100
YIHLSGCTGD AMSLTENYDI LAELLTNMVD IVYGQTLVDL WEMPEMDLAL
110 120 130 140 150
VEGSVCLQDE HSLHELKELR EKAKLVCAFG SCAATGCFTR YSRGGQQAQP
160 170 180 190 200
SHESFVPIAD LIDVDLALPG CPPSPEIIAK TVVALLNNDM DYLQPMLDLA
210 220 230 240 250
GYTEACGCDL QTKVVNQGLC IGCGTCAMAC QTRALDMTNG RPELNSDRCI
260 270
KCGICYVQCP RSWWPEEQIK KELGL
Length:275
Mass (Da):30,238
Last modified:October 5, 2010 - v1
Checksum:i858E41DFB402030A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001710 Genomic DNA. Translation: ADL59255.1.
RefSeqiWP_013296465.1. NC_014408.1.

Genome annotation databases

EnsemblBacteriaiADL59255; ADL59255; MTBMA_c16840.
GeneIDi9705395.
KEGGimmg:MTBMA_c16840.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001710 Genomic DNA. Translation: ADL59255.1.
RefSeqiWP_013296465.1. NC_014408.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3ZFSelectron microscopy4.00B1-275[»]
4CI0electron microscopy3.36B1-275[»]
4OMFX-ray1.71G1-275[»]
SMRiD9PYF7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi79929.MTBMA_c16840.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADL59255; ADL59255; MTBMA_c16840.
GeneIDi9705395.
KEGGimmg:MTBMA_c16840.

Phylogenomic databases

eggNOGiarCOG02473. Archaea.
COG1941. LUCA.
HOGENOMiHOG000236993.
KOiK00443.
OMAiDMEYLQP.

Family and domain databases

Gene3Di3.40.50.700. 1 hit.
InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR017681. Coenz_F420_hydrogenase_gsu.
IPR006137. NADH_UbQ_OxRdtase-like_20kDa.
[Graphical view]
PfamiPF00037. Fer4. 2 hits.
PF01058. Oxidored_q6. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03294. FrhG. 1 hit.
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD9PYF7_METTM
AccessioniPrimary (citable) accession number: D9PYF7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 2, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.