ID D9J2T9_MOMBA Unreviewed; 246 AA. AC D9J2T9; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 27-MAR-2024, entry version 95. DE RecName: Full=rRNA N-glycosylase {ECO:0000256|ARBA:ARBA00012001}; DE EC=3.2.2.22 {ECO:0000256|ARBA:ARBA00012001}; DE AltName: Full=rRNA N-glycosidase {ECO:0000256|ARBA:ARBA00030788}; DE Flags: Fragment; GN Name=RIP {ECO:0000313|EMBL:ADK23804.1}; OS Momordica balsamina (Bitter gourd) (Balsam apple). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica. OX NCBI_TaxID=3672 {ECO:0000313|EMBL:ADK23804.1}; RN [1] {ECO:0007829|PDB:3MRW} RP X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Kushwaha G.S., Pandey N., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal Structure of type I ribosome inactivating protein from Momordica RT balsamina at 1.7 A resolution."; RL Submitted (APR-2010) to the PDB data bank. RN [2] {ECO:0000313|PDB:3N3X, ECO:0007829|PDB:3N3X} RP X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Kushwaha G.S., Vikram G., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal Structure of the complex formed between type I ribosome RT inactivating protein and hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 1.7 A RT resolution."; RL Submitted (MAY-2010) to the PDB data bank. RN [3] {ECO:0000313|PDB:3N31, ECO:0007829|PDB:3N31} RP X-RAY CRYSTALLOGRAPHY (2.11 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Kushwaha G.S., Pandey N., Perbandt M., Betzel C., Sinha M., Kaur P., RA Sharma S., Singh T.P.; RT "Crystal Structure of the complex of type I ribosome inactivating protein RT with fucose at 2.1A resolution."; RL Submitted (MAY-2010) to the PDB data bank. RN [4] {ECO:0000313|PDB:3N5D, ECO:0007829|PDB:3N5D} RP X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Pandey N., Kushwaha G.S., Sinha M., Kaur P., Betzel C., Sharma S., RA Singh T.P.; RT "Crystal structure of the complex of type I ribosome inactivating protein RT with glucose at 1.9A resolution."; RL Submitted (MAY-2010) to the PDB data bank. RN [5] {ECO:0000313|PDB:3N2D, ECO:0007829|PDB:3N2D} RP X-RAY CRYSTALLOGRAPHY (2.22 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Kushwaha G.S., Prem Kumar R., Sinha M., Bhushan A., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal Structure of the Complex of type I Ribosome inactivating protein RT with hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 2.2 A resolution."; RL Submitted (MAY-2010) to the PDB data bank. RN [6] {ECO:0000313|PDB:3NJS, ECO:0007829|PDB:3NJS} RP X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Pandey N., Kushwaha G.S., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of the complex formed between typeI ribosome RT inactivating protein and lactose at 2.1A resolution."; RL Submitted (JUN-2010) to the PDB data bank. RN [7] {ECO:0000313|PDB:3NFM, ECO:0007829|PDB:3NFM} RP X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS) IN COMPLEX WITH FRUCTOSE, AND RP GLYCOSYLATION AT ASN-227. RA Kushwaha G.S., Pandey N., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal Structure of the complex of type I ribosome inactivating protein RT with fructose at 2.5A resolution."; RL Submitted (JUN-2010) to the PDB data bank. RN [8] {ECO:0000313|PDB:3NX9, ECO:0007829|PDB:3NX9} RP X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Pandey N., Kushwaha G.S., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of type I ribosome inactivating protein in complex with RT maltose at 1.7A resolution."; RL Submitted (JUL-2010) to the PDB data bank. RN [9] {ECO:0007829|PDB:3Q4P} RP X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Kushwaha G.S., Yamini S., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of the complex of type I ribosome inactivating protein RT with 7n-methyl-8-hydroguanosine-5-p-diphosphate at 1.8 A resolution."; RL Submitted (DEC-2010) to the PDB data bank. RN [10] {ECO:0007829|PDB:3QJI} RP X-RAY CRYSTALLOGRAPHY (1.75 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Kumar M., Kushwaha G.S., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of the complex of ribosome inactivating protein with 7- RT methylguanosine triphosphate at 1.75A resolution."; RL Submitted (JAN-2011) to the PDB data bank. RN [11] {ECO:0007829|PDB:3U6T} RP X-RAY CRYSTALLOGRAPHY (1.85 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Kushwaha G.S., Sinha M., Bhushan A., Kaur P., RA Sharma S., Singh T.P.; RT "Crystal structure of the complex of type I Ribosome inactivating protein RT in complex with Kanamycin at 1.85 A."; RL Submitted (OCT-2011) to the PDB data bank. RN [12] {ECO:0007829|PDB:3U8F} RP X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of the complex of type I Ribosome inactivating protein RT in complex with Mycolic acid at 1.8 A resolution."; RL Submitted (OCT-2011) to the PDB data bank. RN [13] {ECO:0007829|PDB:3U70} RP X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Pandey N., Kushwaha G.S., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of type 1 ribosome inactivating protein complexed with RT adenine in low ionic solvent."; RL Submitted (OCT-2011) to the PDB data bank. RN [14] {ECO:0007829|PDB:3V14} RP X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Kushwaha G.S., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structure of the complex of type I Ribosome inactivating protein RT complexed with Trehalose at 1.70 A resolution."; RL Submitted (DEC-2011) to the PDB data bank. RN [15] {ECO:0000313|EMBL:ADK23804.1, ECO:0007829|PDB:3N1N} RP X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RX PubMed=22361570; DOI=10.1016/j.bbapap.2012.02.005; RA Kushwaha G.S., Pandey N., Sinha M., Singh S.B., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structures of a type-1 ribosome inactivating protein from RT Momordica balsamina in the bound and unbound states."; RL Biochim. Biophys. Acta 1824:679-691(2012). RN [16] {ECO:0007829|PDB:4DWM} RP X-RAY CRYSTALLOGRAPHY (1.62 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of the complex of type I Ribosome inactivating protein RT with N-acetylglucosamine at 1.62 A resolution."; RL Submitted (FEB-2012) to the PDB data bank. RN [17] {ECO:0007829|PDB:4F9N} RP X-RAY CRYSTALLOGRAPHY (2.65 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Kushwaha G.S., Bhushan S., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structure of the complex of type I Ribosome inactivating protein RT from Momordica balsamina with N7-methylated guanine at 2.65 A resolution."; RL Submitted (MAY-2012) to the PDB data bank. RN [18] {ECO:0007829|PDB:4FZ9} RP X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) IN COMPLEX WITH BETA-D-MANNOSE, AND RP GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Kushwaha G.S., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structure of the complex of Ribosome inactivating protein from RT Momordica Balsamina with disaccharide, N-Acetylglucosamine (beta-1, 4) RT Mannose at 1.7 A resolution."; RL Submitted (JUL-2012) to the PDB data bank. RN [19] {ECO:0007829|PDB:4FXA} RP X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Singh A., Pandey S., Kushwaha G.S., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structure of the complex of Ribosome inactivating protein from RT Momordica balsamina with N-acetyl arginine at 1.7 Angstrom resolution."; RL Submitted (JUL-2012) to the PDB data bank. RN [20] {ECO:0007829|PDB:4GUW} RP X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Singh A., Pandey S., Kushwaha G.S., Bhushan A., Sinha M., Kaur P., RA Sharma S., Singh T.P.; RT "Crystal structure of type 1 Ribosome inactivating protein from Momordica RT balsamina with lipopolysaccharide at 1.6 Angstrom resolution."; RL Submitted (AUG-2012) to the PDB data bank. RN [21] {ECO:0007829|PDB:4H0Z} RP X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Singh A., Pandey S., Kushwaha G.S., Sinha M., Bhushan A., Kaur P., RA Sharma S., Singh T.P.; RT "Crystal structure of the complex of Ribosome inactivating protein from RT Momordica balsamina with N-acetyl muramic acid at 2.0 Angstrom RT resolution."; RL Submitted (SEP-2012) to the PDB data bank. RN [22] {ECO:0007829|PDB:4HOA} RP X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey N., Kushwaha G.S., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structure of the complex of type 1 ribosome inactivating protein RT from Momordica Balsamina with B-D-galactopyranosyl-(1-4)-D-glucose at 2.0 A RT resolution."; RL Submitted (OCT-2012) to the PDB data bank. RN [23] {ECO:0007829|PDB:4EMF, ECO:0007829|PDB:4EMR} RP X-RAY CRYSTALLOGRAPHY (1.75 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RX PubMed=23280611; DOI=10.1002/prot.24248; RA Kushwaha G.S., Yamini S., Kumar M., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "First structural evidence of sequestration of mRNA cap structures by type RT 1 ribosome inactivating protein from Momordica balsamina."; RL Proteins 81:896-905(2013). RN [24] {ECO:0007829|PDB:4JTP} RP X-RAY CRYSTALLOGRAPHY (1.85 ANGSTROMS) IN COMPLEX WITH ASCORBATE, AND RP GLYCOSYLATION AT ASN-227. RA Pandey S., Bhushan A., Singh A., Tyagi T.K., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structure of Ribosome inactivating protein from Momordica RT balsamina complexed with Ascorbic acid at 1.85 Angstrom resolution."; RL Submitted (MAR-2013) to the PDB data bank. RN [25] {ECO:0007829|PDB:4JTB} RP X-RAY CRYSTALLOGRAPHY (1.71 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Pandey S., Tyagi T.K., Singh A., Kushwaha G.S., Sinha M., Bhushan A., RA Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of Ribosome inactivating protein from Momordica RT balsamina complexed with phosphate ion at 1.71 Angstrom resolution."; RL Submitted (MAR-2013) to the PDB data bank. RN [26] {ECO:0007829|PDB:4K2Z} RP X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Kushwaha G.S., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structure of the complex of type I Ribosome inactivating protein RT from Momordica balsamina with Methylethylamine at 1.80 A resolution."; RL Submitted (APR-2013) to the PDB data bank. RN [27] {ECO:0007829|PDB:4KWN} RP X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Singh A., Bhushan A., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "A new stabilizing water structure at the substrate binding site in RT ribosome inactivating protein from Momordica balsamina at 1.80 A RT resolution."; RL Submitted (MAY-2013) to the PDB data bank. RN [28] {ECO:0007829|PDB:4KMK} RP X-RAY CRYSTALLOGRAPHY (1.65 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Kushwaha G.S., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structure of Ribosome Inactivating protein from Momordica RT balsamina at 1.65 A resolution."; RL Submitted (MAY-2013) to the PDB data bank. RN [29] {ECO:0007829|PDB:4KL4} RP X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Pandey S., Tyagi T.K., Singh A., Bhushan A., Kushwaha G.S., Sinha M., RA Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of Ribosome inactivating protein from Momordica RT balsamina complexed with Polyethylene glycol at 1.90 Angstrom resolution."; RL Submitted (MAY-2013) to the PDB data bank. RN [30] {ECO:0007829|PDB:4KPV} RP X-RAY CRYSTALLOGRAPHY (2.57 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Kushwaha G.S., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structure of the complex of ribosome inactivating protein from RT Momordica balsamina with Pyrimidine-2,4(1H,3H)-dione at 2.57 A RT resolution."; RL Submitted (MAY-2013) to the PDB data bank. RN [31] {ECO:0007829|PDB:4L66} RP X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Kushwaha G.S., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structure of Ribosome inactivating protein from Momordica RT balsamina with highly ordered water structure in the substrate binding RT site."; RL Submitted (JUN-2013) to the PDB data bank. RN [32] {ECO:0007829|PDB:4LT4} RP X-RAY CRYSTALLOGRAPHY (1.69 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Bhushan S., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of arginine inhibited Ribosome inactivating protein from RT Momordica balsamina at 1.69 A resolution."; RL Submitted (JUL-2013) to the PDB data bank. RN [33] {ECO:0007829|PDB:4LRO} RP X-RAY CRYSTALLOGRAPHY (1.98 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Sinha M., Bhushan A., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of spermidine inhibited Ribosome inactivating protein RT from Momordica balsamina."; RL Submitted (JUL-2013) to the PDB data bank. RN [34] {ECO:0007829|PDB:4LWX} RP X-RAY CRYSTALLOGRAPHY (1.78 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Kushwaha G.S., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structure of the complex of Ribosome inactivating protein from RT Momordica Balsamina with peptidoglycan fragment at 1.78 A resolution."; RL Submitted (JUL-2013) to the PDB data bank. RN [35] {ECO:0007829|PDB:4M5A} RP X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Kushwaha G.S., Sinha M., Bhushan A., Kaur P., RA Sharma S., Singh T.P.; RT "Crystal structure of the complex of Ribosome inactivating protein from RT Momordica balsamina inhibited by asymmetric dimethyl arginine at 1.70 A RT resolution."; RL Submitted (AUG-2013) to the PDB data bank. RN [36] {ECO:0007829|PDB:4O4Q} RP X-RAY CRYSTALLOGRAPHY (1.81 ANGSTROMS) IN COMPLEX WITH UDP, AND RP GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Bhushan A., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of the complex formed between type 1 ribosome RT inactivating protein and uridine diphosphate at 1.81 A resolution."; RL Submitted (DEC-2013) to the PDB data bank. RN [37] {ECO:0007829|PDB:4O0O} RP X-RAY CRYSTALLOGRAPHY (2.59 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Kushwaha G.S., Sinha M., Kaur P., Sharma S., RA Singh T.P.; RT "Crystal structure of the complex of type 1 Ribosome inactivating protein RT from Momordica balsamina with 5-fluorouracil at 2.59 A resolution."; RL Submitted (DEC-2013) to the PDB data bank. RN [38] {ECO:0007829|PDB:4O8E} RP X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Pandey S., Yamini S., Bhushan A., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of the complex of type I ribosome inactivating protein RT from Momordica balsamina with uridine triphosphate at 2.0 A resolution."; RL Submitted (DEC-2013) to the PDB data bank. RN [39] {ECO:0007829|PDB:4Q9F} RP X-RAY CRYSTALLOGRAPHY (1.75 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Kushwaha G.S., Pandey S., Sinha M., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of type 1 ribosome inactivating protein from Momordica RT balsamina in complex with guanosine mono phosphate at 1.75 Angstrom RT resolution."; RL Submitted (MAY-2014) to the PDB data bank. RN [40] {ECO:0007829|PDB:4RZJ} RP X-RAY CRYSTALLOGRAPHY (1.98 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Pandey S., Kushwaha G.S., Kaur P., Sharma S., Singh T.P.; RT "Structure of the complex of type 1 ribosome inactivating protein from RT Momordica balsamina with N-acetylglucosamine at 1.98 Angstrom resolution RT using crystals grown in different conditions."; RL Submitted (DEC-2014) to the PDB data bank. RN [41] {ECO:0007829|PDB:4ZT8, ECO:0007829|PDB:4ZU0} RP X-RAY CRYSTALLOGRAPHY (1.78 ANGSTROMS) IN COMPLEX WITH CTP, AND RP GLYCOSYLATION AT ASN-227. RX PubMed=29124196; DOI=10.1016/j.bbrep.2015.09.006; RA Yamini S., Pandey S.N., Kaur P., Sharma S., Singh T.P.; RT "Binding and structural studies of the complexes of type 1 ribosome RT inactivating protein from Momordica balsamina with cytosine, cytidine, and RT cytidine diphosphate."; RL Biochem. Biophys. Rep. 4:134-140(2015). RN [42] {ECO:0007829|PDB:4XY7} RP X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Yamini S., Pandey S., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of the complex of ribosome inactivating protein from RT Momordica balsamina with N- acetylglucosamine at 2.5 A resolution."; RL Submitted (FEB-2015) to the PDB data bank. RN [43] {ECO:0007829|PDB:5CIX} RP X-RAY CRYSTALLOGRAPHY (1.88 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Singh P.K., Pandey S., Tyagi T.K., Singh A., Kaur P., Sharma S., RA Singh T.P.; RT "Structure of the complex of type 1 Ribosome inactivating protein with RT triethanolamine at 1.88 Angstrom resolution."; RL Submitted (JUL-2015) to the PDB data bank. RN [44] {ECO:0007829|PDB:5ILX} RP X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Singh P.K., Singh A., Pandey S., Kaur P., Sharma S., Singh T.P.; RT "Crystal structure of Ribosome inactivating protein from Momordica RT balsamina with Uracil at 1.70 Angstrom resolution."; RL Submitted (MAR-2016) to the PDB data bank. RN [45] {ECO:0007829|PDB:5GM7} RP X-RAY CRYSTALLOGRAPHY (1.78 ANGSTROMS), AND GLYCOSYLATION AT ASN-227 AND RP THR-229. RA Singh B., Singh P.K., Pandey S.N.; RT "Crystal structure of Ribosome inactivating protein from Momordica RT balsamina at 1.78 Angstrom resolution."; RL Submitted (JUL-2016) to the PDB data bank. RN [46] {ECO:0007829|PDB:5GZ7} RP X-RAY CRYSTALLOGRAPHY (1.95 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Tiwari P., Pandey S.N., Kaur P., Sharma S., Singh T.P.; RT "Crystal Structure of the complex of Ribosome Inactivating Protein with RT 1,2-ethanediol at 1.95 Angstrom resolution."; RL Submitted (SEP-2016) to the PDB data bank. RN [47] {ECO:0007829|PDB:5WV1} RP X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RA Shokeen A., Singh P.K., Pandey S.; RT "Crystal structure of the complex of Ribosome inactivating protein from RT Momordica balsamina with ribose sugar at1.90 A resolution."; RL Submitted (DEC-2016) to the PDB data bank. RN [48] {ECO:0007829|PDB:5ILW, ECO:0007829|PDB:5Y48} RP X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS), AND GLYCOSYLATION AT ASN-227. RX PubMed=30007053; DOI=10.1002/prot.25584; RA Pandey S.N., Iqbal N., Singh P.K., Rastogi N., Kaur P., Sharma S., RA Singh T.P.; RT "Binding and structural studies of the complexes of type 1 ribosome RT inactivating protein from Momordica balsamina with uracil and uridine."; RL Proteins 87:99-109(2019). CC -!- CATALYTIC ACTIVITY: CC Reaction=Endohydrolysis of the N-glycosidic bond at one specific CC adenosine on the 28S rRNA.; EC=3.2.2.22; CC Evidence={ECO:0000256|ARBA:ARBA00000237}; CC -!- SIMILARITY: Belongs to the ribosome-inactivating protein family. Type 1 CC RIP subfamily. {ECO:0000256|ARBA:ARBA00008544}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; HM367595; ADK23804.1; -; mRNA. DR PDB; 3MRW; X-ray; 1.70 A; A=1-246. DR PDB; 3N1N; X-ray; 2.23 A; A=1-246. DR PDB; 3N2D; X-ray; 2.22 A; A=1-246. DR PDB; 3N31; X-ray; 2.11 A; A=1-246. DR PDB; 3N3X; X-ray; 1.70 A; A=1-246. DR PDB; 3N5D; X-ray; 1.90 A; A=1-246. DR PDB; 3NFM; X-ray; 2.50 A; A=1-246. DR PDB; 3NJS; X-ray; 2.10 A; A=1-246. DR PDB; 3NX9; X-ray; 1.70 A; A=1-246. DR PDB; 3Q4P; X-ray; 1.80 A; A=1-246. DR PDB; 3QJI; X-ray; 1.75 A; A=1-246. DR PDB; 3RL9; X-ray; 1.90 A; A=1-246. DR PDB; 3S9Q; X-ray; 1.67 A; A=1-246. DR PDB; 3SJ6; X-ray; 1.60 A; A=1-246. DR PDB; 3U6T; X-ray; 1.85 A; A=1-246. DR PDB; 3U6Z; X-ray; 1.70 A; A=1-246. DR PDB; 3U70; X-ray; 2.00 A; A=1-246. DR PDB; 3U8F; X-ray; 1.80 A; A=1-246. DR PDB; 3V14; X-ray; 1.70 A; A=1-246. DR PDB; 3V2K; X-ray; 2.07 A; A=1-246. DR PDB; 4DWM; X-ray; 1.62 A; A=1-246. DR PDB; 4EMF; X-ray; 1.77 A; A=1-246. DR PDB; 4EMR; X-ray; 1.75 A; A=1-246. DR PDB; 4F9N; X-ray; 2.65 A; A=1-246. DR PDB; 4FXA; X-ray; 1.70 A; A=1-246. DR PDB; 4FZ9; X-ray; 1.70 A; A=1-246. DR PDB; 4GUW; X-ray; 1.60 A; A=1-246. DR PDB; 4H0Z; X-ray; 2.00 A; A=1-246. DR PDB; 4HOA; X-ray; 2.00 A; A=1-246. DR PDB; 4I47; X-ray; 2.65 A; A=1-246. DR PDB; 4JTB; X-ray; 1.71 A; A=1-246. DR PDB; 4JTP; X-ray; 1.85 A; A=1-246. DR PDB; 4K2Z; X-ray; 1.80 A; A=1-246. DR PDB; 4KL4; X-ray; 1.90 A; A=1-246. DR PDB; 4KMK; X-ray; 1.65 A; A=1-246. DR PDB; 4KPV; X-ray; 2.57 A; A=1-246. DR PDB; 4KWN; X-ray; 1.80 A; A=1-246. DR PDB; 4L66; X-ray; 1.70 A; A=1-246. DR PDB; 4LRO; X-ray; 1.98 A; A=1-246. DR PDB; 4LT4; X-ray; 1.69 A; A=1-246. DR PDB; 4LWX; X-ray; 1.78 A; A=1-246. DR PDB; 4M5A; X-ray; 1.70 A; A=1-246. DR PDB; 4O0O; X-ray; 2.59 A; A=1-246. DR PDB; 4O4Q; X-ray; 1.81 A; A=1-246. DR PDB; 4O8E; X-ray; 2.00 A; A=1-246. DR PDB; 4Q9F; X-ray; 1.75 A; A=1-246. DR PDB; 4RZJ; X-ray; 1.98 A; A=1-246. DR PDB; 4XY7; X-ray; 2.50 A; A=1-246. DR PDB; 4ZT8; X-ray; 1.98 A; A=1-246. DR PDB; 4ZU0; X-ray; 1.80 A; A=1-246. DR PDB; 4ZZ6; X-ray; 2.00 A; A=1-246. DR PDB; 5CIX; X-ray; 1.88 A; A=1-246. DR PDB; 5CSO; X-ray; 1.78 A; A=1-246. DR PDB; 5CST; X-ray; 1.78 A; A=1-246. DR PDB; 5GM7; X-ray; 1.78 A; A=1-246. DR PDB; 5GZ7; X-ray; 1.95 A; A=1-246. DR PDB; 5ILW; X-ray; 1.98 A; A=1-246. DR PDB; 5ILX; X-ray; 1.70 A; A=1-246. DR PDB; 5WV1; X-ray; 1.90 A; A=1-246. DR PDB; 5Y48; X-ray; 1.70 A; A=1-246. DR PDBsum; 3MRW; -. DR PDBsum; 3N1N; -. DR PDBsum; 3N2D; -. DR PDBsum; 3N31; -. DR PDBsum; 3N3X; -. DR PDBsum; 3N5D; -. DR PDBsum; 3NFM; -. DR PDBsum; 3NJS; -. DR PDBsum; 3NX9; -. DR PDBsum; 3Q4P; -. DR PDBsum; 3QJI; -. DR PDBsum; 3RL9; -. DR PDBsum; 3S9Q; -. DR PDBsum; 3SJ6; -. DR PDBsum; 3U6T; -. DR PDBsum; 3U6Z; -. DR PDBsum; 3U70; -. DR PDBsum; 3U8F; -. DR PDBsum; 3V14; -. DR PDBsum; 3V2K; -. DR PDBsum; 4DWM; -. DR PDBsum; 4EMF; -. DR PDBsum; 4EMR; -. DR PDBsum; 4F9N; -. DR PDBsum; 4FXA; -. DR PDBsum; 4FZ9; -. DR PDBsum; 4GUW; -. DR PDBsum; 4H0Z; -. DR PDBsum; 4HOA; -. DR PDBsum; 4I47; -. DR PDBsum; 4JTB; -. DR PDBsum; 4JTP; -. DR PDBsum; 4K2Z; -. DR PDBsum; 4KL4; -. DR PDBsum; 4KMK; -. DR PDBsum; 4KPV; -. DR PDBsum; 4KWN; -. DR PDBsum; 4L66; -. DR PDBsum; 4LRO; -. DR PDBsum; 4LT4; -. DR PDBsum; 4LWX; -. DR PDBsum; 4M5A; -. DR PDBsum; 4O0O; -. DR PDBsum; 4O4Q; -. DR PDBsum; 4O8E; -. DR PDBsum; 4Q9F; -. DR PDBsum; 4RZJ; -. DR PDBsum; 4XY7; -. DR PDBsum; 4ZT8; -. DR PDBsum; 4ZU0; -. DR PDBsum; 4ZZ6; -. DR PDBsum; 5CIX; -. DR PDBsum; 5CSO; -. DR PDBsum; 5CST; -. DR PDBsum; 5GM7; -. DR PDBsum; 5GZ7; -. DR PDBsum; 5ILW; -. DR PDBsum; 5ILX; -. DR PDBsum; 5WV1; -. DR PDBsum; 5Y48; -. DR BRENDA; 3.2.2.22; 14081. DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW. DR GO; GO:0030598; F:rRNA N-glycosylase activity; IEA:UniProtKB-EC. DR GO; GO:0090729; F:toxin activity; IEA:UniProtKB-KW. DR GO; GO:0017148; P:negative regulation of translation; IEA:UniProtKB-KW. DR Gene3D; 3.40.420.10; Ricin (A subunit), domain 1; 1. DR Gene3D; 4.10.470.10; Ricin (A Subunit), domain 2; 1. DR InterPro; IPR036041; Ribosome-inact_prot_sf. DR InterPro; IPR017989; Ribosome_inactivat_1/2. DR InterPro; IPR001574; Ribosome_inactivat_prot. DR InterPro; IPR017988; Ribosome_inactivat_prot_CS. DR InterPro; IPR016138; Ribosome_inactivat_prot_sub1. DR InterPro; IPR016139; Ribosome_inactivat_prot_sub2. DR PANTHER; PTHR33453; -; 1. DR PANTHER; PTHR33453:SF34; DUF6598 DOMAIN-CONTAINING PROTEIN; 1. DR Pfam; PF00161; RIP; 1. DR PRINTS; PR00396; SHIGARICIN. DR SUPFAM; SSF56371; Ribosome inactivating proteins (RIP); 1. DR PROSITE; PS00275; SHIGA_RICIN; 1. PE 1: Evidence at protein level; KW 3D-structure {ECO:0007829|PDB:3MRW, ECO:0007829|PDB:3N1N}; KW Hydrolase {ECO:0000256|ARBA:ARBA00022801}; KW Nucleotide-binding {ECO:0007829|PDB:4O4Q, ECO:0007829|PDB:4ZU0}; KW Protein synthesis inhibitor {ECO:0000256|ARBA:ARBA00023193}; KW Toxin {ECO:0000256|ARBA:ARBA00022656}. FT BINDING 69 FT /ligand="UDP" FT /ligand_id="ChEBI:CHEBI:58223" FT /evidence="ECO:0007829|PDB:4O4Q" FT BINDING 69 FT /ligand="UTP" FT /ligand_id="ChEBI:CHEBI:46398" FT /evidence="ECO:0007829|PDB:4O8E" FT BINDING 70 FT /ligand="CDP" FT /ligand_id="ChEBI:CHEBI:58069" FT /evidence="ECO:0007829|PDB:5CST" FT BINDING 70 FT /ligand="CMP" FT /ligand_id="ChEBI:CHEBI:60377" FT /evidence="ECO:0007829|PDB:4ZU0" FT BINDING 70 FT /ligand="CTP" FT /ligand_id="ChEBI:CHEBI:37563" FT /evidence="ECO:0007829|PDB:4ZZ6" FT BINDING 70 FT /ligand="GMP" FT /ligand_id="ChEBI:CHEBI:58115" FT /evidence="ECO:0007829|PDB:4Q9F" FT BINDING 70 FT /ligand="adenine" FT /ligand_id="ChEBI:CHEBI:16708" FT /ligand_label="1" FT /evidence="ECO:0007829|PDB:3U6Z, ECO:0007829|PDB:3U70" FT BINDING 70 FT /ligand="cytidine" FT /ligand_id="ChEBI:CHEBI:17562" FT /evidence="ECO:0007829|PDB:5CSO" FT BINDING 71 FT /ligand="CDP" FT /ligand_id="ChEBI:CHEBI:58069" FT /evidence="ECO:0007829|PDB:5CST" FT BINDING 71 FT /ligand="CMP" FT /ligand_id="ChEBI:CHEBI:60377" FT /evidence="ECO:0007829|PDB:4ZU0" FT BINDING 71 FT /ligand="CTP" FT /ligand_id="ChEBI:CHEBI:37563" FT /evidence="ECO:0007829|PDB:4ZZ6" FT BINDING 71 FT /ligand="GMP" FT /ligand_id="ChEBI:CHEBI:58115" FT /evidence="ECO:0007829|PDB:4Q9F" FT BINDING 71 FT /ligand="L-ascorbate" FT /ligand_id="ChEBI:CHEBI:38290" FT /evidence="ECO:0007829|PDB:4JTP" FT BINDING 71 FT /ligand="N-acetyl-alpha-D-glucosamine" FT /ligand_id="ChEBI:CHEBI:44278" FT /evidence="ECO:0007829|PDB:4LWX" FT BINDING 71 FT /ligand="UTP" FT /ligand_id="ChEBI:CHEBI:46398" FT /evidence="ECO:0007829|PDB:4O8E" FT BINDING 71 FT /ligand="adenine" FT /ligand_id="ChEBI:CHEBI:16708" FT /ligand_label="2" FT /evidence="ECO:0007829|PDB:3RL9" FT BINDING 71 FT /ligand="adenine" FT /ligand_id="ChEBI:CHEBI:16708" FT /ligand_label="1" FT /evidence="ECO:0007829|PDB:3U6Z, ECO:0007829|PDB:3U70" FT BINDING 71 FT /ligand="cytidine" FT /ligand_id="ChEBI:CHEBI:17562" FT /evidence="ECO:0007829|PDB:5CSO" FT BINDING 71 FT /ligand="guanine" FT /ligand_id="ChEBI:CHEBI:16235" FT /evidence="ECO:0007829|PDB:3N1N, ECO:0007829|PDB:3N3X" FT BINDING 85 FT /ligand="CDP" FT /ligand_id="ChEBI:CHEBI:58069" FT /evidence="ECO:0007829|PDB:5CST" FT BINDING 85 FT /ligand="CMP" FT /ligand_id="ChEBI:CHEBI:60377" FT /evidence="ECO:0007829|PDB:4ZU0" FT BINDING 85 FT /ligand="CTP" FT /ligand_id="ChEBI:CHEBI:37563" FT /evidence="ECO:0007829|PDB:4ZZ6" FT BINDING 85 FT /ligand="GMP" FT /ligand_id="ChEBI:CHEBI:58115" FT /evidence="ECO:0007829|PDB:4Q9F" FT BINDING 85 FT /ligand="cytidine" FT /ligand_id="ChEBI:CHEBI:17562" FT /evidence="ECO:0007829|PDB:5CSO" FT BINDING 109 FT /ligand="L-ascorbate" FT /ligand_id="ChEBI:CHEBI:38290" FT /evidence="ECO:0007829|PDB:4JTP" FT BINDING 109 FT /ligand="adenine" FT /ligand_id="ChEBI:CHEBI:16708" FT /ligand_label="1" FT /evidence="ECO:0007829|PDB:3U6Z, ECO:0007829|PDB:3U70" FT BINDING 109 FT /ligand="adenine" FT /ligand_id="ChEBI:CHEBI:16708" FT /ligand_label="2" FT /evidence="ECO:0007829|PDB:3RL9" FT BINDING 109 FT /ligand="beta-D-fructose" FT /ligand_id="ChEBI:CHEBI:28645" FT /evidence="ECO:0007829|PDB:3NFM" FT BINDING 109 FT /ligand="guanine" FT /ligand_id="ChEBI:CHEBI:16235" FT /evidence="ECO:0007829|PDB:3N1N" FT BINDING 110 FT /ligand="CDP" FT /ligand_id="ChEBI:CHEBI:58069" FT /evidence="ECO:0007829|PDB:5CST" FT BINDING 110 FT /ligand="CTP" FT /ligand_id="ChEBI:CHEBI:37563" FT /evidence="ECO:0007829|PDB:4ZZ6" FT BINDING 111 FT /ligand="CDP" FT /ligand_id="ChEBI:CHEBI:58069" FT /evidence="ECO:0007829|PDB:5CST" FT BINDING 111 FT /ligand="CMP" FT /ligand_id="ChEBI:CHEBI:60377" FT /evidence="ECO:0007829|PDB:4ZU0" FT BINDING 111 FT /ligand="CTP" FT /ligand_id="ChEBI:CHEBI:37563" FT /evidence="ECO:0007829|PDB:4ZZ6" FT BINDING 111 FT /ligand="GMP" FT /ligand_id="ChEBI:CHEBI:58115" FT /evidence="ECO:0007829|PDB:4Q9F" FT BINDING 111 FT /ligand="L-ascorbate" FT /ligand_id="ChEBI:CHEBI:38290" FT /evidence="ECO:0007829|PDB:4JTP" FT BINDING 111 FT /ligand="N-acetyl-alpha-D-glucosamine" FT /ligand_id="ChEBI:CHEBI:44278" FT /evidence="ECO:0007829|PDB:4LWX" FT BINDING 111 FT /ligand="UDP" FT /ligand_id="ChEBI:CHEBI:58223" FT /evidence="ECO:0007829|PDB:4O4Q" FT BINDING 111 FT /ligand="UTP" FT /ligand_id="ChEBI:CHEBI:46398" FT /evidence="ECO:0007829|PDB:4O8E" FT BINDING 111 FT /ligand="beta-D-fructose" FT /ligand_id="ChEBI:CHEBI:28645" FT /evidence="ECO:0007829|PDB:3NFM" FT BINDING 111 FT /ligand="cytidine" FT /ligand_id="ChEBI:CHEBI:17562" FT /evidence="ECO:0007829|PDB:5CSO" FT BINDING 112 FT /ligand="CDP" FT /ligand_id="ChEBI:CHEBI:58069" FT /evidence="ECO:0007829|PDB:5CST" FT BINDING 112 FT /ligand="CMP" FT /ligand_id="ChEBI:CHEBI:60377" FT /evidence="ECO:0007829|PDB:4ZU0" FT BINDING 112 FT /ligand="CTP" FT /ligand_id="ChEBI:CHEBI:37563" FT /evidence="ECO:0007829|PDB:4ZZ6" FT BINDING 122 FT /ligand="CTP" FT /ligand_id="ChEBI:CHEBI:37563" FT /evidence="ECO:0007829|PDB:4ZZ6" FT BINDING 160 FT /ligand="CTP" FT /ligand_id="ChEBI:CHEBI:37563" FT /evidence="ECO:0007829|PDB:4ZZ6" FT BINDING 160 FT /ligand="UTP" FT /ligand_id="ChEBI:CHEBI:46398" FT /evidence="ECO:0007829|PDB:4O8E" FT BINDING 160 FT /ligand="cytidine" FT /ligand_id="ChEBI:CHEBI:17562" FT /evidence="ECO:0007829|PDB:5CSO" FT BINDING 160 FT /ligand="guanine" FT /ligand_id="ChEBI:CHEBI:16235" FT /evidence="ECO:0007829|PDB:3N1N, ECO:0007829|PDB:3N3X" FT BINDING 163 FT /ligand="CDP" FT /ligand_id="ChEBI:CHEBI:58069" FT /evidence="ECO:0007829|PDB:5CST" FT BINDING 163 FT /ligand="CMP" FT /ligand_id="ChEBI:CHEBI:60377" FT /evidence="ECO:0007829|PDB:4ZU0" FT BINDING 163 FT /ligand="CTP" FT /ligand_id="ChEBI:CHEBI:37563" FT /evidence="ECO:0007829|PDB:4ZZ6" FT BINDING 163 FT /ligand="N-acetyl-alpha-D-glucosamine" FT /ligand_id="ChEBI:CHEBI:44278" FT /evidence="ECO:0007829|PDB:4LWX" FT BINDING 163 FT /ligand="UDP" FT /ligand_id="ChEBI:CHEBI:58223" FT /evidence="ECO:0007829|PDB:4O4Q" FT BINDING 163 FT /ligand="UTP" FT /ligand_id="ChEBI:CHEBI:46398" FT /evidence="ECO:0007829|PDB:4O8E" FT BINDING 163 FT /ligand="beta-D-fructose" FT /ligand_id="ChEBI:CHEBI:28645" FT /evidence="ECO:0007829|PDB:3NFM" FT BINDING 163 FT /ligand="cytidine" FT /ligand_id="ChEBI:CHEBI:17562" FT /evidence="ECO:0007829|PDB:5CSO" FT BINDING 163 FT /ligand="guanine" FT /ligand_id="ChEBI:CHEBI:16235" FT /evidence="ECO:0007829|PDB:3N1N, ECO:0007829|PDB:3N3X" FT MOD_RES 71 FT /note="N2-acetylarginine" FT /evidence="ECO:0007829|PDB:4FXA" FT MOD_RES 85 FT /note="N2-acetylarginine" FT /evidence="ECO:0007829|PDB:4FXA" FT MOD_RES 109 FT /note="N2-acetylarginine" FT /evidence="ECO:0007829|PDB:4FXA" FT MOD_RES 163 FT /note="N2-acetylarginine" FT /evidence="ECO:0007829|PDB:4FXA" FT CARBOHYD 71 FT /note="N-acetyl-D-glucosamine 1" FT /evidence="ECO:0007829|PDB:4DWM" FT CARBOHYD 71 FT /note="N-acetyl-D-glucosamine 2" FT /evidence="ECO:0007829|PDB:4RZJ" FT CARBOHYD 109 FT /note="N-acetyl-D-glucosamine 2" FT /evidence="ECO:0007829|PDB:4RZJ" FT CARBOHYD 111 FT /note="N-acetyl-D-glucosamine 1" FT /evidence="ECO:0007829|PDB:4DWM" FT CARBOHYD 111 FT /note="N-acetyl-D-glucosamine 2" FT /evidence="ECO:0007829|PDB:4RZJ" FT CARBOHYD 163 FT /note="N-acetyl-D-glucosamine 1" FT /evidence="ECO:0007829|PDB:4DWM" FT CARBOHYD 226 FT /note="N-acetyl-D-glucosamine 3" FT /evidence="ECO:0007829|PDB:3Q4P, ECO:0007829|PDB:3S9Q" FT CARBOHYD 226 FT /note="N-acetyl-D-glucosamine 4" FT /evidence="ECO:0007829|PDB:4H0Z" FT CARBOHYD 227 FT /note="N-acetyl-D-glucosamine 3" FT /evidence="ECO:0007829|PDB:3Q4P, ECO:0007829|PDB:3S9Q" FT CARBOHYD 227 FT /note="N-acetyl-D-glucosamine 4" FT /evidence="ECO:0007829|PDB:4H0Z" FT CARBOHYD 227 FT /note="N-acetyl-D-glucosamine 5" FT /evidence="ECO:0007829|PDB:3RL9, ECO:0007829|PDB:3U6T" FT CARBOHYD 227 FT /note="N-acetyl-D-glucosamine 6" FT /evidence="ECO:0007829|PDB:4FXA, ECO:0007829|PDB:5GM7" FT CARBOHYD 227 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0007829|PDB:3Q4P, ECO:0007829|PDB:3RL9" FT CARBOHYD 229 FT /note="N-acetyl-D-glucosamine 4" FT /evidence="ECO:0007829|PDB:4H0Z" FT CARBOHYD 229 FT /note="N-acetyl-D-glucosamine 6" FT /evidence="ECO:0007829|PDB:4FXA, ECO:0007829|PDB:5GM7" FT NON_TER 1 FT /evidence="ECO:0000313|EMBL:ADK23804.1" FT NON_TER 246 FT /evidence="ECO:0000313|EMBL:ADK23804.1" SQ SEQUENCE 246 AA; 27069 MW; 6B38879C004BB72D CRC64; DVSFRLSGAD PSSYGMFIKD LRNALPHTEK VYNIPLLLPS VSGAGRYLLM HLFNYDGNTI TVAVDVTNVY IMGYLALTTS YFFNEPAADL ASQYVFRSAR RKITLPYSGN YERLQIAAGK PREKIPIGLP ALDTAISTLL HYDSTAAAGA LLVLIQTTAE AARFKYIEQQ IQERAYRDEV PSSATISLEN SWSGLSKQIQ LAQGNNGVFR TPTVLVDSKG NRVQITNVTS NVVTSNIQLL LNTKNI //