D8UF24 (D8UF24_VOLCA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Aminomethyltransferase RuleBase RU003981
EC=2.1.2.10 RuleBase RU003981

Gene names

ORF Names:

VOLCADRAFT_107582 EMBL EFJ41696.1

Organism

Volvox carteri (Green alga) [Complete proteome]

Taxonomic identifier

3067 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Chlorophyta › Chlorophyceae › Chlamydomonadales › Volvocaceae › Volvox

Protein attributes

Sequence length	420 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The glycine cleavage system catalyzes the degradation of glycine By similarity. RuleBase RU003981
Catalytic activity	[Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH3. RuleBase RU003981
Subunit structure	The glycine cleavage system is composed of four proteins: P, T, L and H By similarity. RuleBase RU003981
Sequence similarities	Belongs to the GcvT family. RuleBase RU003980

Ontologies

Keywords
Molecular function	Aminotransferase RuleBase RU003981 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glycine catabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	aminomethyltransferase activity Inferred from electronic annotation. Source: EC transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8UF24 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 3BD75DAF6787EE0D	FASTA	420	45,040
	10 20 30 40 50 60 MSSTRRLLTL LPQLGRAGAL RASEHASATG SLLFTRGFAD DANLKKTVLY DFHVANGGKM 70 80 90 100 110 120 VPFAGWSMPI QYKDSIMEST IFCRKNASLF DVSHMCGLTL KGKDAIKFLE GLVVGDIAGL 130 140 150 160 170 180 KDGTGSLSVF TNEQGGIIDD TVITKVNGQE IYVVVNAGCR DKDLAHLDKH LQAAKSKGLD 190 200 210 220 230 240 VALTVHDDRS LLALQGPAAK DVLGALAPGV DLAAMYFSDF RTFDVAGIPC WVTRTGYTGE 250 260 270 280 290 300 DGFEISVPST HAVALAEKLT ASERVRLAGL GPRDSLRLEA GLCLYGNDLN ESLTPVEAGL 310 320 330 340 350 360 AWTIGKRRRE GFDFLGGDVI KKQLAEGVSK RRVGFVSSGA PARQHSVIST PDGQVVGEVT 370 380 390 400 410 420 SGAFSPCLKK NIAMGYVEKD FSKPGTQLKV EVRGKQNEAV VTKMPFLPTP YYKRPEAAKK

References

[1]

"Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri." Prochnik S.E., Umen J., Nedelcu A.M., Hallmann A., Miller S.M., Nishii I., Ferris P., Kuo A., Mitros T., Fritz-Laylin L.K., Hellsten U., Chapman J., Simakov O., Rensing S.A., Terry A., Pangilinan J., Kapitonov V., Jurka J. , Salamov A., Shapiro H., Schmutz J., Grimwood J., Lindquist E., Lucas S., Grigoriev I.V., Schmitt R., Kirk D., Rokhsar D.S. Science 329:223-226(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: f. Nagariensis / Eve.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL378391 Genomic DNA. Translation: EFJ41696.1.
RefSeq	XP_002957198.1. XM_002957152.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	9626693.
KEGG	vcn:VOLCADRAFT_107582.
Phylogenomic databases
KO	K00605.
Family and domain databases
Gene3D	3.30.1360.120. 2 hits.
InterPro	IPR013977. GCV_T_C. IPR006222. GCV_T_N. IPR006223. GcvT. IPR027266. TrmE/GcvT_dom1. [Graphical view]
PANTHER	PTHR13847:SF5. PTHR13847:SF5. 1 hit.
Pfam	PF01571. GCV_T. 1 hit. PF08669. GCV_T_C. 1 hit. [Graphical view]
PIRSF	PIRSF006487. GcvT. 1 hit.
TIGRFAMs	TIGR00528. gcvT. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D8UF24_VOLCA

Accession

Primary (citable) accession number: D8UF24

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)