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Protein
Submitted name:

Putative uncharacterized protein

Gene

VOLCADRAFT_63500

Organism
Volvox carteri f. nagariensis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetaseUniRule annotation, Ligase

Keywords - Biological processi

Protein biosynthesisUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:VOLCADRAFT_63500Imported
OrganismiVolvox carteri f. nagariensisImported
Taxonomic identifieri3068 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesVolvocaceaeVolvox
Proteomesi
  • UP000001058 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 33Sequence analysisAdd BLAST33
ChainiPRO_500312412834 – 393Sequence analysisAdd BLAST360

Family & Domainsi

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

InParanoidiD8U3K7.
KOiK01867.

Family and domain databases

CDDicd00806. TrpRS_core. 1 hit.
Gene3Di3.40.50.620. 1 hit.
HAMAPiMF_00140_B. Trp_tRNA_synth_B. 1 hit.
InterProiIPR001412. aa-tRNA-synth_I_CS.
IPR002305. aa-tRNA-synth_Ic.
IPR014729. Rossmann-like_a/b/a_fold.
IPR002306. Trp-tRNA-ligase.
IPR024109. Trp-tRNA-ligase_bac-type.
[Graphical view]
PANTHERiPTHR10055. PTHR10055. 1 hit.
PfamiPF00579. tRNA-synt_1b. 1 hit.
[Graphical view]
PRINTSiPR01039. TRNASYNTHTRP.
TIGRFAMsiTIGR00233. trpS. 1 hit.
PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8U3K7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDDITAHIVS SHAFLFTHHF LSLVPFLVPL CFPSTPHPLT PPTPLRSKRI
60 70 80 90 100
LSGVQPTGRP TLGNYLGAMK NWVALQEQYD NFFCVVDLHA ITVPHDPREL
110 120 130 140 150
RAATRSMAAT YIAAGIDPDR ATIFVQSHVP AHTELAWLLS CVTPVGWLGR
160 170 180 190 200
MIQFKEKSRK QGEDVRTGLM TYPVLMAADI LLYQADLVPV GEDQKQHLEL
210 220 230 240 250
TRDIAEKVNL EFGGKGWKKR GGRGGRVFKV PEVFLPPAGA RIMSLQDGTA
260 270 280 290 300
KMSKSAENDN SRINLTDSPE VIAAKIKRCK TDTVEGLEWG NTDRPEATNL
310 320 330 340 350
LAIYSLCTGK SKDEVVSECA SMRWGTFKPL LADAIIEHLK PLQVKYGELM
360 370 380 390
SDQSYIDAVL AKGAEAASAT ADRTLADVRD AMGFVAPFRA PRS
Length:393
Mass (Da):43,249
Last modified:October 5, 2010 - v1
Checksum:iEFD4CEAF171655AD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL378356 Genomic DNA. Translation: EFJ45625.1.
RefSeqiXP_002953315.1. XM_002953269.1.

Genome annotation databases

GeneIDi9622332.
KEGGivcn:VOLCADRAFT_63500.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL378356 Genomic DNA. Translation: EFJ45625.1.
RefSeqiXP_002953315.1. XM_002953269.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi9622332.
KEGGivcn:VOLCADRAFT_63500.

Phylogenomic databases

InParanoidiD8U3K7.
KOiK01867.

Family and domain databases

CDDicd00806. TrpRS_core. 1 hit.
Gene3Di3.40.50.620. 1 hit.
HAMAPiMF_00140_B. Trp_tRNA_synth_B. 1 hit.
InterProiIPR001412. aa-tRNA-synth_I_CS.
IPR002305. aa-tRNA-synth_Ic.
IPR014729. Rossmann-like_a/b/a_fold.
IPR002306. Trp-tRNA-ligase.
IPR024109. Trp-tRNA-ligase_bac-type.
[Graphical view]
PANTHERiPTHR10055. PTHR10055. 1 hit.
PfamiPF00579. tRNA-synt_1b. 1 hit.
[Graphical view]
PRINTSiPR01039. TRNASYNTHTRP.
TIGRFAMsiTIGR00233. trpS. 1 hit.
PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD8U3K7_VOLCA
AccessioniPrimary (citable) accession number: D8U3K7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 30, 2016
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.