D8TZ59 (D8TZ59_VOLCA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
AP2 family transcription factor EMBL EFJ47122.1

Gene names

ORF Names:

VOLCADRAFT_127468 EMBL EFJ47122.1

Organism

Volvox carteri (Green alga) [Complete proteome]

Taxonomic identifier

3067 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Chlorophyta › Chlorophyceae › Chlamydomonadales › Volvocaceae › Volvox

Protein attributes

Sequence length	1355 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Cellular component	Nucleus SAAS SAAS016177
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8TZ59 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 4616C39B0996F766	FASTA	1,355	137,706
	10 20 30 40 50 60 MTASIRGGVL TLQLQLSEIH ELAGAADGDN AGYAITPMDL TSGQPLGPSL LLSTVSLLAA 70 80 90 100 110 120 AAASAAAAAA ERAGPLLRES QELPPPLQQQ QQQRQQRYHD AGGAASTAAA AAGSGSYSSQ 130 140 150 160 170 180 RVQRRSDEES PMEPSSGGNQ LQLTPVPEDD KALVDTPAAA PLPLPAPQNG GVGQLEGTAN 190 200 210 220 230 240 GVVQPDDGKG EALRQAARRS GRLGSGGGGG DGDVNSVDSG RDVSGGGGAA HGRSAWDDTA 250 260 270 280 290 300 APAMMSAGNG CGSSGSVAAA AAAAAATALN AYRNGNPAAA AAALAVFRKY QAQQQRQRQD 310 320 330 340 350 360 RYLDTRMDEL DPDKDLYEHE RHPSHAKGPG ALARSFDGGG SVRQDNSDGP DTTVFCNSRH 370 380 390 400 410 420 SLDLGAHGAP IGRYDAVRTA AGRYVEAPYD DHDDVDTLAT RGFVRRRASE VGPEPSSWSW 430 440 450 460 470 480 GGLHEGHRVA AVAASAEPLR QQQQMYSQRR LSSTYPYRQP PPQCWSYRPV QYVEPPYEGS 490 500 510 520 530 540 DNPYGPADEH YEYDKFLPQP TPSADFLLEG GTRKRPRVAS APAATAAPGG TAAAAAPSPR 550 560 570 580 590 600 SGSGGAAALL DLNAMHVGPR SQNGLSERTT EYVVPEGPHA GVARLRLPLP VTQLAAAAGR 610 620 630 640 650 660 AGVANASAYM KAAAAAAAAA LKSQNRYGPA AAIGAAADEG KLGAAAGRTD GSAAFPSRHG 670 680 690 700 710 720 TATGGDMPSG GAQRAEPLVS PSARRTDRSA AAGDGATAAA AAASGHAALH QQARQKFKAA 730 740 750 760 770 780 PERERGTDMT RAGAAIAAAA MAAVASAGPG QVAGGGGDDD RDSEMTESIG VAMSSPGSAA 790 800 810 820 830 840 AVAVAGGNGD VDGPVDAAAR DGGGGACDAA AAATGGAAAS SPPAAAAQQP TARGTADAPK 850 860 870 880 890 900 GPTPKLKPGP VAARARGAVR YRGVRQRPWG KFAAEIRDPA KGGRLWLGTF DTAEDAARAY 910 920 930 940 950 960 DEAARSLRGA GARVNFPLPA ECGEEGEEEG AAANRALSDG EVHGEVVQGG GAAAVAGPRG 970 980 990 1000 1010 1020 GAGTRGGAAS VANGTSGEAA GGATCWRRTS QNRHGTDPWT GFSGLEAIVA AAAAVAEEEE 1030 1040 1050 1060 1070 1080 AEARRAAAAA AAAAAAVAES RQPPPQHQEH SPLQGERRLD VPQRGPMSVG AVVAAAAPPQ 1090 1100 1110 1120 1130 1140 RLEAAWRDRG GEFSPLDLDL DHHGDAEGPG AQEHARQRHH PELQQIESSG GGGSGGGRNG 1150 1160 1170 1180 1190 1200 AQRSLWSGED ADAKVDSGEG RGEESGGGPG QEGRVRPVDC PSDGGGRLVV VPRGVGRALG 1210 1220 1230 1240 1250 1260 PARVRTDDLL TAAQVLLETG GGGRTAFLPL VARLKREPME YGQPYAVVRP PTVSLEEEVE 1270 1280 1290 1300 1310 1320 VGGHDLAAAR MVVAQKMNCP EYSADETHGS GKQQQHPQPC TPREGDAFPE TGIDESVVEV 1330 1340 1350 MEEEEEPPQR RQRVDLAEEE VEAACGEYVD APICA

References

[1]

"Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri." Prochnik S.E., Umen J., Nedelcu A.M., Hallmann A., Miller S.M., Nishii I., Ferris P., Kuo A., Mitros T., Fritz-Laylin L.K., Hellsten U., Chapman J., Simakov O., Rensing S.A., Terry A., Pangilinan J., Kapitonov V., Jurka J. , Salamov A., Shapiro H., Schmutz J., Grimwood J., Lindquist E., Lucas S., Grigoriev I.V., Schmitt R., Kirk D., Rokhsar D.S. Science 329:223-226(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: f. Nagariensis / Eve.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL378346 Genomic DNA. Translation: EFJ47122.1.
RefSeq	XP_002951671.1. XM_002951625.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	9615755.
KEGG	vcn:VOLCADRAFT_127468.
Family and domain databases
Gene3D	3.30.730.10. 1 hit.
InterPro	IPR001471. AP2/ERF_dom. IPR016177. DNA-bd_integrase-typ. [Graphical view]
Pfam	PF00847. AP2. 1 hit. [Graphical view]
PRINTS	PR00367. ETHRSPELEMNT.
SMART	SM00380. AP2. 1 hit. [Graphical view]
SUPFAM	SSF54171. DNA-binding_integrase-type. 1 hit.
PROSITE	PS51032. AP2_ERF. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D8TZ59_VOLCA

Accession

Primary (citable) accession number: D8TZ59

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	March 6, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)