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Protein
Submitted name:

Putative uncharacterized protein

Gene

VOLCADRAFT_59473

Organism
Volvox carteri (Green alga)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:VOLCADRAFT_59473Imported
OrganismiVolvox carteri (Green alga)Imported
Taxonomic identifieri3067 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesVolvocaceaeVolvox
ProteomesiUP000001058 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliD8TSV1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiD8TSV1.
KOiK01641.

Family and domain databases

Gene3Di3.40.47.10. 1 hit.
InterProiIPR013746. HMG_CoA_synt_C_dom.
IPR013528. HMG_CoA_synth_N.
IPR010122. HMG_CoA_synthase_euk.
IPR016039. Thiolase-like.
IPR016038. Thiolase-like_subgr.
[Graphical view]
PfamiPF08540. HMG_CoA_synt_C. 1 hit.
PF01154. HMG_CoA_synt_N. 1 hit.
[Graphical view]
SUPFAMiSSF53901. SSF53901. 3 hits.
TIGRFAMsiTIGR01833. HMG-CoA-S_euk. 1 hit.

Sequencei

Sequence statusi: Complete.

D8TSV1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATYRHGKDR PRPDSVGVLA LEVYFPTQHV LMSDMELADG CPGKYTRGLE
60 70 80 90 100
QEAMSFCSDR EDVVSMALTV AKSLMDKYRV RPAEVGHLQV ATESAVDRSK
110 120 130 140 150
SIKSHLMTLW RRAVGGGPPA EGVDCVHACY GGTAALLAAV DWVESRRWDG
160 170 180 190 200
RLALVVAADV ALYAPGTPAR PTGGCGAAAI LVGPDAPLVL DPLWYGSHAE
210 220 230 240 250
HSWDFYKPLG TLPYPAVDGP RTLVQYLRAM GMCGMRLLDR VQRAGELAPE
260 270 280 290 300
EGVHHFVAHA PFSKLARKGL ARLALMDAIC RAAAGLSSYE SYATWRLEDK
310 320 330 340 350
ELEAQLVAGT TLEWREKAED GSWLQKQVGN SYTASVWQGL ASLVWRQGAQ
360 370 380 390 400
LAGRRLLLFS FGSGTIASLF SLVCGPSDPR FTLESIQGVL DLGERLRARV
410 420 430 440 450
RRPLEVFDAV SAQVVASYAC PVPYEPRGDV ADVAAGSYYL LRVDEHSRRW

YGRKV
Length:455
Mass (Da):49,694
Last modified:October 5, 2010 - v1
Checksum:i0ED94CCB1853DFA8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL378335 Genomic DNA. Translation: EFJ49546.1.
RefSeqiXP_002949527.1. XM_002949481.1.

Genome annotation databases

GeneIDi9618698.
KEGGivcn:VOLCADRAFT_59473.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL378335 Genomic DNA. Translation: EFJ49546.1.
RefSeqiXP_002949527.1. XM_002949481.1.

3D structure databases

ProteinModelPortaliD8TSV1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi9618698.
KEGGivcn:VOLCADRAFT_59473.

Phylogenomic databases

InParanoidiD8TSV1.
KOiK01641.

Family and domain databases

Gene3Di3.40.47.10. 1 hit.
InterProiIPR013746. HMG_CoA_synt_C_dom.
IPR013528. HMG_CoA_synth_N.
IPR010122. HMG_CoA_synthase_euk.
IPR016039. Thiolase-like.
IPR016038. Thiolase-like_subgr.
[Graphical view]
PfamiPF08540. HMG_CoA_synt_C. 1 hit.
PF01154. HMG_CoA_synt_N. 1 hit.
[Graphical view]
SUPFAMiSSF53901. SSF53901. 3 hits.
TIGRFAMsiTIGR01833. HMG-CoA-S_euk. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: f. Nagariensis / EveImported.

Entry informationi

Entry nameiD8TSV1_VOLCA
AccessioniPrimary (citable) accession number: D8TSV1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: May 27, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.