D8TE48 (D8TE48_SELML) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
NADH-ubiquinone oxidoreductase chain 4 RuleBase RU003297
EC=1.6.5.3 RuleBase RU003297

Gene names

ORF Names:

SELMODRAFT_137786 EMBL EFJ05036.1

Encoded on

Mitochondrion EMBL EFJ05036.1

Organism

Selaginella moellendorffii (Spikemoss) [Complete proteome] EMBL EFJ05036.1

Taxonomic identifier

88036 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Lycopodiophyta › Isoetopsida › Selaginellales › Selaginellaceae › Selaginella

Protein attributes

Sequence length	524 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	NADH + ubiquinone = NAD+ + ubiquinol. RuleBase RU003297
Sequence similarities	Belongs to the complex I subunit 4 family. RuleBase RU003297

Ontologies

Keywords
Cellular component	Mitochondrion RuleBase RU000318 EMBL EFJ05036.1
Ligand	NAD RuleBase RU000317 Ubiquinone RuleBase RU000318
Molecular function	Oxidoreductase RuleBase RU000317
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	mitochondrial electron transport, NADH to ubiquinone Inferred from electronic annotation. Source: EnsemblPlants/Gramene secretion by cell Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Cellular_component	cytoplasmic membrane-bounded vesicle Inferred from electronic annotation. Source: EnsemblPlants/Gramene mitochondrion Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	NADH dehydrogenase (ubiquinone) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D8TE48 [UniParc]. Last modified October 5, 2010. Version 1. Checksum: 8E5530326E078571	FASTA	524	55,832
	10 20 30 40 50 60 MTSNYPWPTI IVPLPVPAGL LIPPLPPPKG GNKIVRRYTL GIRSPEFPPI THTLCYHFES 70 80 90 100 110 120 KSPFVQSRED YDWINIPPDF HWRLGIDGLT MGLIPPTGFV TTSATPAARP VTRSPRSFYP 130 140 150 160 170 180 SMLAMHSGQV GSFASQDILP PFLVWEPELI PAHSLLRSWG GKRRSYAATK SIPYTAAGGP 190 200 210 220 230 240 ISLLSGAITM GLYMPGEPAL DFRVPADRSH PAALEMVSYL SFPIAYAIKP PILPSHARSP 250 260 270 280 290 300 DTHGEAHYST RMLPAGASSK MGGYGPLRIN MESSPSAHSI FAPGLAVVGA IQIVCAASIS 310 320 330 340 350 360 PNQRSVKRRI AHPPVSHTGF VPIGIGPITE IGPEGAILQM ISHGLIGAAL SPIGGAGCDR 370 380 390 400 410 420 MQTPFLGRMG GIAIPMPKIF ILFSSLPIAS LALPGMSGSA AESMVSPGIA GSTNRSYDSK 430 440 450 460 470 480 IIVLVTAAIG IILTPIHPLS MPRQMPYGYS GVTPAVPRVM DYGPREIFIP IRPLLPVIGI 490 500 510 520 GLYPNAVLSL CQSGIYPISI SPEQTAIYPF HSFPPAANKI IVDQ

References

[1]

"The Selaginella genome identifies genetic changes associated with the evolution of vascular plants." Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C. , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Sorensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V. Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL377739 Genomic DNA. Translation: EFJ05036.1.
RefSeq	XP_002993895.1. XM_002993849.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	EFJ05036; EFJ05036; SELMODRAFT_137786.
GeneID	9639121.
KEGG	smo:SELMODRAFT_137786.
Phylogenomic databases
KO	K05575.
Family and domain databases
InterPro	IPR010227. NADH_Q_OxRdtase_chainM/4. IPR001750. NADH_UbQ/plastoQ_OxRdtase. IPR003918. NADH_UbQ_OxRdtase. [Graphical view]
Pfam	PF00361. Oxidored_q1. 1 hit. [Graphical view]
PRINTS	PR01437. NUOXDRDTASE4.
TIGRFAMs	TIGR01972. NDH_I_M. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D8TE48_SELML

Accession

Primary (citable) accession number: D8TE48

Entry history

Integrated into UniProtKB/TrEMBL:	October 5, 2010
Last sequence update:	October 5, 2010
Last modified:	April 3, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)