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Protein
Submitted name:

Putative uncharacterized protein

Gene

SELMODRAFT_269944

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:SELMODRAFT_269944Imported
OrganismiSelaginella moellendorffii (Spikemoss)Imported
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
ProteomesiUP000001514 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi88036.EFJ06433.

Family & Domainsi

Phylogenomic databases

InParanoidiD8TAC4.
KOiK01595.
OMAiHISKEIA.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8TAC4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSIDDRMRL LVPTKVTADD KLIEYDMLLL NHFLSVLKDL HGEEMRELVH
60 70 80 90 100
RCYELSGQYG QAEGCGDPAK LEDLGNLVKS LQPGPAIVIA SSLSHMLNLG
110 120 130 140 150
NLAEEVQIAH RRRVSEKSGG IGDENSALTE SDIEETFRRL MKLGKSPQEI
160 170 180 190 200
FEALKTQTVD LVLTAHPTQS IRRSLLQKHS RIRSCLSELY KDDITPDEKQ
210 220 230 240 250
ELEEALHREV QAAFRTDEIR RTPPTPQDEM RAGMSYFHET IWNCLPKFLR
260 270 280 290 300
RVDTALKAIG INERLPYNVP LIQFSSWMGG DRDGNPRVTP EVTRDVCLLA
310 320 330 340 350
RLMASSLYFS QIEDLMFELS MWRCNEELRA RVAQLELRTK EDAKHYKEFW
360 370 380 390 400
KPIPSNEPFR VILGDIRDRL YRTRERARQI LATGKSDVNE EEAFSSVEEI
410 420 430 440 450
LEPLELCYRS LCSTGDKLIA DGSLLDFMRQ VSCFGLGLVR LDIRQESDRH
460 470 480 490 500
TDVMDAITTH LGIGSYRSWT EEERQEWLLA ELRGKRPLFG ADLPKTDEIK
510 520 530 540 550
DVLETFHVIA ELPTDCFGAY IISMATAPSD VLVVELLQRE CRVNVPLRVV
560 570 580 590 600
PLFEKLADLE AAPASLTRLF SIDWYRNRIK GKQEVMIGYS DSGKDAGRFS
610 620 630 640 650
AAWQLYKCQE ELVKVAKQFG VKLTMFHGRG GTVGRGGGPT HLAILSQPRD
660 670 680 690 700
TIDGSLRVTI QGEVIEQSFG EEHLCFRTLQ RFTAATLEHG MHPPTAPKED
710 720 730 740 750
WRKLMDEMAA IATEAYRSVV FKDPQFVHYF RMATPELEYG RMNIGSRPSK
760 770 780 790 800
RKPSGGIESL RAIPWIFAWT QTRFHLPVWL GFGEAFKDVI DGNPQTLKML
810 820 830 840 850
QAMYREWPFF RVTVDLVEMV FAKGDPRIAE LYDRLLVSPE LQDIGKKLRG
860 870 880 890 900
KYEETRKLLL EVACHSELLE ENPTLKQRLR LREPFITTLN VQQAYTLKKM
910 920 930 940 950
RQIEPDDAPM PRTNANSASA EELVELNTTT EYAPGLEDTI ILTMKGIAAG

MQNTG
Length:955
Mass (Da):108,872
Last modified:October 5, 2010 - v1
Checksum:i91728E45085913C6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377701 Genomic DNA. Translation: EFJ06433.1.
RefSeqiXP_002992495.1. XM_002992449.1.
UniGeneiSmo.1073.

Genome annotation databases

EnsemblPlantsiEFJ06433; EFJ06433; SELMODRAFT_269944.
GeneIDi9629223.
KEGGismo:SELMODRAFT_269944.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377701 Genomic DNA. Translation: EFJ06433.1.
RefSeqiXP_002992495.1. XM_002992449.1.
UniGeneiSmo.1073.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi88036.EFJ06433.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEFJ06433; EFJ06433; SELMODRAFT_269944.
GeneIDi9629223.
KEGGismo:SELMODRAFT_269944.

Phylogenomic databases

InParanoidiD8TAC4.
KOiK01595.
OMAiHISKEIA.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The Selaginella genome identifies genetic changes associated with the evolution of vascular plants."
    Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M., dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W., Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D., Chapple C., Cheng C.
    , Correa L.G., Dacre M., DeBarry J., Dreyer I., Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K., Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M., Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G., Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y., Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K., Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R., Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B., Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y., Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N., Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N., Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S., Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q., Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J., Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.
    Science 332:960-963(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD8TAC4_SELML
AccessioniPrimary (citable) accession number: D8TAC4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: June 24, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.