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Protein

Xylose isomerase

Gene

SELMODRAFT_161472

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotation
Biological processCarbohydrate metabolism, Xylose metabolismUniRule annotation
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
ORF Names:SELMODRAFT_161472Imported
OrganismiSelaginella moellendorffii (Spikemoss)Imported
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiopsidaSelaginellalesSelaginellaceaeSelaginella
Proteomesi
  • UP000001514 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_500312333025 – 478Xylose isomeraseSequence analysisAdd BLAST454

Interactioni

Protein-protein interaction databases

STRINGi88036.EFJ07726

Structurei

3D structure databases

ProteinModelPortaliD8T6H4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IG6W Eukaryota
COG2115 LUCA
InParanoidiD8T6H4
KOiK01805
OMAiAMDVMAL
OrthoDBiEOG093609VP

Family and domain databases

HAMAPiMF_00455 Xylose_isom_A, 1 hit
InterProiView protein in InterPro
IPR036237 Xyl_isomerase-like_sf
IPR013452 Xylose_isom_bac
IPR001998 Xylose_isomerase
PANTHERiPTHR32176:SF0 PTHR32176:SF0, 1 hit
PRINTSiPR00688 XYLOSISMRASE
SUPFAMiSSF51658 SSF51658, 1 hit
TIGRFAMsiTIGR02630 xylose_isom_A, 1 hit
PROSITEiView protein in PROSITE
PS51415 XYLOSE_ISOMERASE, 1 hit

Sequencei

Sequence statusi: Complete.

D8T6H4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRMGRRSICL ASFVALLCLG STLATQEKRV ADQTCGSGFQ EGEVEFFPNI
60 70 80 90 100
SKIEYEGPSS KNPLAFKWYN PEEEIYGKKM KDWLRFSVAF WHTFRGDGSD
110 120 130 140 150
PFGSPTKQWP WDDGTDSLEM AFTRMRANFE FLKKLGLNRW CFHDRDIAPE
160 170 180 190 200
GRTLEESNAN LDKVVALAKQ LQEGTDIRPL WGTAQLFKHP RYMHGAATSP
210 220 230 240 250
DARIYAYAAA QVKKAMEATK ELGGENYVFW GGREGYQSLL NTDLERELNH
260 270 280 290 300
LGQFLKSAAE YKKKIEFDGV LLIEPKPQEP TKHQYDWDAA TAIGFLQKYG
310 320 330 340 350
LKDDFKLNIE CNHATLAGHS CYHELEVSRI NGVLGNIDAN TGDAQTGWDT
360 370 380 390 400
DQFLMDIAET TQVMLSVLQN GGLAPGGFNF DAKLRRESTD VEDLFISHIA
410 420 430 440 450
GMDAMARGLR NAAKILEEGT LPSIVKERYA SFDSALGASI ESGELGFEEL
460 470
EQEALRMEEP LPASGKQELA EMVFYNSI
Length:478
Mass (Da):53,632
Last modified:October 5, 2010 - v1
Checksum:iFD95907576BBF9DA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL377681 Genomic DNA Translation: EFJ07726.1
RefSeqiXP_002991182.1, XM_002991136.1
UniGeneiSmo.15770

Genome annotation databases

EnsemblPlantsiEFJ07726; EFJ07726; SELMODRAFT_161472
GeneIDi9635117
GrameneiEFJ07726; EFJ07726; SELMODRAFT_161472
KEGGismo:SELMODRAFT_161472

Similar proteinsi

Entry informationi

Entry nameiD8T6H4_SELML
AccessioniPrimary (citable) accession number: D8T6H4
Entry historyiIntegrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: April 25, 2018
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health